Gene Tery_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1620 
Symbol 
ID4242404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2473654 
End bp2474316 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content40% 
IMG OID638106762 
Productputative monovalent cation/H+ antiporter subunit B 
Protein accessionYP_721372 
Protein GI113475311 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.60586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGG TTTATTTTTT AGCGGGAGTA GCATTGTTTA TAACAGTGCT ATTTATACCT 
AACCCAATGG GAGAATGGGA TAGAATACCT ATTGTTGAAT CAATAGTCGC GGATAGTGGA
GTAGCTAATG CAGTTTCTGG CATCATTTTT AGAAATCGAC TTTATGACAC GGTTTTTGAG
GTGATAGTAT TTACGATAGC TATCTTGGGT GTTCGTTTTT TATTGTCAGA CGAAGAACCT
ACCGATAATT TTTATAGATT AAGCGATCCC ACATCCAGAG TTTTAGCACG TTTAGGAGCG
ACTATTGCGG CGATGGTGAG TATTGAGTTA TCAATTCGGG GGCATCTGAG TCCGGGGGGT
GGTTTTGCTG CAGGGATAGC AGGAGGAACT GCTATTGGTT TAGTTGCTAT GACTTCATCA
CCGGATAAGA TGGAAAAGAT ATATCAGAGA TGGAATGCTG CTATCTGGGA AAAAGTTTCA
GTTTTAGTAT TCATAATATT GGCAGGGATA ACTATGATGG GATGGGAATT ACCTCAAGGA
ACATTAGGAG ATTTATTTAG TGGAGGAATT GTTCCGATAC TGAATTTTTT GGTGGCTATA
AAAGTGGCAT TGGGTTCGTG GGCGGTTATT TTATTGTTTA TTCGTTATCG GGGGTTGTTG
TGA
 
Protein sequence
MKLVYFLAGV ALFITVLFIP NPMGEWDRIP IVESIVADSG VANAVSGIIF RNRLYDTVFE 
VIVFTIAILG VRFLLSDEEP TDNFYRLSDP TSRVLARLGA TIAAMVSIEL SIRGHLSPGG
GFAAGIAGGT AIGLVAMTSS PDKMEKIYQR WNAAIWEKVS VLVFIILAGI TMMGWELPQG
TLGDLFSGGI VPILNFLVAI KVALGSWAVI LLFIRYRGLL