Gene Tery_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1615 
Symbol 
ID4242399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2470555 
End bp2472012 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content36% 
IMG OID638106757 
Productputative monovalent cation/H+ antiporter subunit D 
Protein accessionYP_721367 
Protein GI113475306 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.619005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATT TGACAGTTGC CTGGATGGCA TTACAATTTT GTGTTGGTTT CATTATCTAT 
TTACTACCCA AATGTTCTCG CTTTCTGGCA CTGGGAGTAG CATTGCTTTC TGTTAACTAT
GCTTTGATAA TATTTGCAGA CCCATCGTTT CTTTTAGAAA TAAAGTTACT TGATAATTTT
GGTGTAACTT TAACTATTGA CCAAATAGGT GGCTTTTTTA TTATCACTAA TGCTCTAGTA
ACAACAGCAG TAATATTTTA CTGTTGGGAT AGCAATAAAA CAGCTTTTTT CTATATGCAA
TTAACGATTT TGCATGCTAG TGTTAATGCT ACTTTTATTT GTACAGATTT TATTAGTTTG
TATGTAGCTT TGGAAGTAAT TACTATTGCT TCATTTCTAC TGATAACTTA TAGTCGTACC
GATAGGTCTA TTTGGGTAGG GTTACGCTAT TTGTTTGTGG GTAATACAGG AATGCTGTTT
TATCTTTTAG GGGCAGTTTT AGTATATCAA GCACATCATT CCTTTGGTTT TGAAGGTCTG
CGGGGTGCGC CTCCAGAAGC TATTGCGGTG ATATTTTTGG GATTATTGAT AAAAGGTGGT
ATATTTGTAT CTGGGTTATG GTTGCCCTTA ACTCATTCTG AGTCAGAGAG TCCGGTATCG
GCAATATTGT CAGGAGTGGT AGTCAAGGCA GGAGTTTTTC CATTAGTGCG TTGTGCGCTA
ATTGTAGAAG AAATAGAGCC GATAGTTAGA CTTTTTGGAA TAGGTACGGC CCTTTTAGGA
GTTAGTTTTG CCATATTGGA AAAAGATACT AAGCGTATGC TGGCATTTCA CACTATTTCT
CAGTTGGGTT TTATACTTGC TGCCCCAGTA GTAGGAGGTT TCTATGCTTT GAGTCACGGT
TTGGTTAAAT CTGCTTTGTT TTTAATTTCA GGAGTTTTGC CTAGTCGTAA TTTTAAGGAA
TTACAGAATC ATCCTATTGA TAATAGAATT TGGGTAATTT TAGCGATCGC TAGTTTTTCT
ATTTCTGGTT GTCCATTACT TGCTGGTTTT GAAGCCAAGG TATTAACCTC GAAAAATTTA
TTATCCTGGG AGGTTATTGC TATCAATATT GCAGCAGTAG GAACGGCAAT TTCTTTTGCT
AAATTCATTT TTCTGCCTCA CCAGAAAAAT GAGGAACCAA TCAAAGTTAA TTTGAGTTTT
TGGTTTGCGA TAGTACCATT GATCGGTGGT TTGATAGTGG CAAATGGTTT TTATTCTGAA
GCTTACAACA TTGAAAATAT TACTAAAGCA TTGATAACTA TAACTATTGG TTGGGTAATA
TATATATGTA TTTTTCAGAA ATTGGCGATT AAGTTACCAA GGTCGATGGA AGAATTTGAC
CATCTGATTG GGTTTATGAG CCTAATGTTA ATTTTACTAT TCTGGATGAT ATGGACGCAA
CTGCCCTTTT TAACATAA
 
Protein sequence
MANLTVAWMA LQFCVGFIIY LLPKCSRFLA LGVALLSVNY ALIIFADPSF LLEIKLLDNF 
GVTLTIDQIG GFFIITNALV TTAVIFYCWD SNKTAFFYMQ LTILHASVNA TFICTDFISL
YVALEVITIA SFLLITYSRT DRSIWVGLRY LFVGNTGMLF YLLGAVLVYQ AHHSFGFEGL
RGAPPEAIAV IFLGLLIKGG IFVSGLWLPL THSESESPVS AILSGVVVKA GVFPLVRCAL
IVEEIEPIVR LFGIGTALLG VSFAILEKDT KRMLAFHTIS QLGFILAAPV VGGFYALSHG
LVKSALFLIS GVLPSRNFKE LQNHPIDNRI WVILAIASFS ISGCPLLAGF EAKVLTSKNL
LSWEVIAINI AAVGTAISFA KFIFLPHQKN EEPIKVNLSF WFAIVPLIGG LIVANGFYSE
AYNIENITKA LITITIGWVI YICIFQKLAI KLPRSMEEFD HLIGFMSLML ILLFWMIWTQ
LPFLT