| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1593 |
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| Symbol | |
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| ID | 4242742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2434413 |
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| End bp | 2436308 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638106735 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_721345 |
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| Protein GI | 113475284 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.351482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.814117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AAAAATTGTT AGACTCTAAA TCTGATCAAA CAAATGGTAC AGTAGAAACC
TTAACTGATA AGATAGAAGC TGTATCAATT CAATCTGAGA CAGCTTTGTT CAAGTCGAAA
GGCAAAAAAA AGAAATTGAC CTGGGTTGGT CTCCTAGTAG TTATTTTAGC AACAACTTTT
GGCAGCCTAA AATTTCTCAT CTATCGAAAG ACTTCTCTCA AGCGAACCTC AGAAAGTTCT
CTAGCGAATA TCCTCTCTGT TCAAGCTACC CCCATAAAAT TAGTCAACTC CTACTCAGTT
TCCCAAAGTT ATACAGGAGT TGTAGAAGCC AAAAGAACAA GTGAACTTGG TTTTGAGCAA
TCAGGTTTAC TTAAATTCAT ATATGTAGAA GAGGGTAAAA AAGTAGGCAA AGGAGAAGCG
ATCGCTCAAC TGGATACCAG TCAAACCCAA GCCCAAAAGT CAGTATTAAT AGCTCAGAAA
GAAAGAGCGA TCGCCACCCT CAAAGAACTG CAAACAGGAC CCAGAGTAGA AGTCATTGCA
GCCACCCGAG CATCCCTAGC TCAAGAAAAA GCAAAATTAC AAGAATTGCA AACAGGACCC
AGGGTAGAAG TAATTGCAGC CACCCGTGCA TCCCTTACTC AAGAACAAGC CAAATTACAA
GAACTACAAA CAGGACCCAG AGTAGAAGTA ATTGCAGCCA CCCGTGCATC CCTTACTCAA
GAACAAGCCA AATTACAAGA ACTGCAAACG GGAACCCGCA CCGAAGATAT TGAAGCAGCT
CGTTCAGTAG TTCTAGACTT AGAGGAACAA GTAGAATTAG CTCAACTTCG AGAAAAAAGA
CGTGAAGAAC TTTATAAACA GGGAGCAATT TCTCAAGAAC AACTAGATGT TGCTTCTACT
GAGACCGATA CTCTCAATGC CAGACTGAAA AGAGGGCGGA GTGAACTAGA AAAATTACAA
ACAGGAACTC GCCGCGAACA AATAGAAGCT CAAAAAGCTA GAGTTCGTCA AGTGCAAAGT
CAATTAGATG AACTGATAGC CGGAACTCGC CGCGAACAAA TAGAAGTTCA AAAAGCTAGA
GTTCGTCAAG TGCAAAGTCA GTTAGATGAA CTGATAGCCG GAACTCGCCG CGAACAAATA
GAAGCTCAAA AAGCTAGAGT CCGTCAAGTG CAAAGTCAAT TAGATGAACT TATTGCCGGA
ACTCGCTCCG AACAAATAGA AGCTCAAAAA GCAGAAGTTA AACGTTTCGA GGCACAAATT
TCTGAAATTG ATGTTGTTCT GAGAAAAAGT ATTCTCTATG CGCCTTTTAC TGGCACTATT
TCTGTTCGCC ATTTAGACGA GGGAGTTGTC GTTAATGCAA CTCAAGCTGT TGTGCGTTTA
GTCGAGGATG GTGAAAGGAA AGTTCGGGTT GGGGTGCCGC CGACTCAAGC TAGTCGTTTG
AGAATAGGTA GTTTGGAGGA AGTGAGGATA GCACAGAAAA CTTTAAGTGC ACAAGTGCTG
TCAATTTTAC CAGAGGTAGA TTCTATGACT CGGACTCAAA GTGTAATTTT GGCACTACCT
CAAGCTATAG CTCCAGGTAC TATTGTCAAG TTAGAACTTA ATCAAATTGA AACAGTGACA
GGATATTGGT TGCCGACTTC TGCTTTGGTT TGGGGAGAGC GGGGGTTGTT GGCTTGTTTT
GCTCTTGTCT CTCCTCAGAA ATCAGATTTG GTGATACCTC CCTTAACTTA TCAGACTGAA
AAACGAATGG TTGAAGTTTT GCATACGGAG GGAGACCGGA GTCTGGTGCG AGGACTCTTA
AAACCAGGAG AATTGGTTGT CACAACTGGA ACTAACCAAT TAGTTCCTGG TCAGTTAGTT
CGCTATAGAT TTTTTGGGCA GGAGAAAAAC CAATAA
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| Protein sequence | MKQKKLLDSK SDQTNGTVET LTDKIEAVSI QSETALFKSK GKKKKLTWVG LLVVILATTF
GSLKFLIYRK TSLKRTSESS LANILSVQAT PIKLVNSYSV SQSYTGVVEA KRTSELGFEQ
SGLLKFIYVE EGKKVGKGEA IAQLDTSQTQ AQKSVLIAQK ERAIATLKEL QTGPRVEVIA
ATRASLAQEK AKLQELQTGP RVEVIAATRA SLTQEQAKLQ ELQTGPRVEV IAATRASLTQ
EQAKLQELQT GTRTEDIEAA RSVVLDLEEQ VELAQLREKR REELYKQGAI SQEQLDVAST
ETDTLNARLK RGRSELEKLQ TGTRREQIEA QKARVRQVQS QLDELIAGTR REQIEVQKAR
VRQVQSQLDE LIAGTRREQI EAQKARVRQV QSQLDELIAG TRSEQIEAQK AEVKRFEAQI
SEIDVVLRKS ILYAPFTGTI SVRHLDEGVV VNATQAVVRL VEDGERKVRV GVPPTQASRL
RIGSLEEVRI AQKTLSAQVL SILPEVDSMT RTQSVILALP QAIAPGTIVK LELNQIETVT
GYWLPTSALV WGERGLLACF ALVSPQKSDL VIPPLTYQTE KRMVEVLHTE GDRSLVRGLL
KPGELVVTTG TNQLVPGQLV RYRFFGQEKN Q
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