Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1550 |
Symbol | |
ID | 4242029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2362918 |
End bp | 2364054 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638106693 |
Product | PRC-barrel |
Protein accession | YP_721303 |
Protein GI | 113475242 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.432457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATCTG AAAAAAACCG CCAACGCTCT GAACTGTTAG GAACTCAAAT AATTACTCGT GATAAAGGTA AACGCCTAGG AGTAGTAAGT CAATTATGGG TAGATGTTGA TAAACGGGAA GTAGTAGCTA TTGGGCTACG GGACAATATA TTGGCAGTTG CTGGAATACC TAAGTTTATG TTTCTCAAGG ACGTCTGTGA AATAGGTGAT GTGATATTAG TAGATGACGA AGAAGTAATA GAGGAAGATA TTGATACTGA AGCTTATAGT GGGTTGATAA ATAGTGAAGT TTTGACAGAA AATGGTGATT TTTTAGGCAG GGTTCGAGAT TTCAAGTGTG ATGTAAGAGA TGGTAAAGTT TTGTCATTGA TTATCGCTTC CATTGGTATA CCCCAAATTC CAGACCAAAT TATCAGCACT TATGAAATGC CTATTGATGA AATTGTTGCT AGTGGGCCCA ATCGTCTAAT TGTTTTTGAA GGTTCTGAAG AAAAACTACA ACAGTTAACA GTAGGAGTAT TGGAACGTCT GGGTCTAGCA GAAGCACCTT GGCAAAAAGA GGAAGAAGGT TTATATAACC CTCCTACTGT AAATCCTGAT AACCAATTAG GTCCAGGACA GTTAGTGTCT CGTGAACCTA TTCGTACAGC CAGACGCTCT ACTCAGGAGA CATGGGATGA TAACTGGGTT GAACCAGAGC CAGTAGAAAG TAGGGTAATT GAACCAGAAC CAGTTTATCG TAAGTATTAT GAACAAGAAA TGGCTCCTCC TCCCCGGCAG CGAGAACAAG AAGCGGTTTA TGATAATTAT TATGAGCCAG AGCCTGTTGC TCCCCCATCA GCGCGTCAGG TAAGGGTAGA ACCTGCTGAT AATGACTACT ATGAGGAAGA AGGTAATTGG GGTGACTCAG AGACTGGATA TGATAATGAA CAGGATAGAT ATCAGAAGAA AGAGGATGGA TATCAGAAGA AAGAGGATGG ATATCAGAAG AAAGAATATA AAGCAACTTC GGAGTATGAA TATGATGAGG AGATAGATAG AGATGCTTGG GCTGATGATG AGGCTCCAAA ACCTTATCAG GCTCCACGGG TGAATATTCC TGAAAAAACT AAGGTCCCAG AATATGAAGA TTATTAG
|
Protein sequence | MRSEKNRQRS ELLGTQIITR DKGKRLGVVS QLWVDVDKRE VVAIGLRDNI LAVAGIPKFM FLKDVCEIGD VILVDDEEVI EEDIDTEAYS GLINSEVLTE NGDFLGRVRD FKCDVRDGKV LSLIIASIGI PQIPDQIIST YEMPIDEIVA SGPNRLIVFE GSEEKLQQLT VGVLERLGLA EAPWQKEEEG LYNPPTVNPD NQLGPGQLVS REPIRTARRS TQETWDDNWV EPEPVESRVI EPEPVYRKYY EQEMAPPPRQ REQEAVYDNY YEPEPVAPPS ARQVRVEPAD NDYYEEEGNW GDSETGYDNE QDRYQKKEDG YQKKEDGYQK KEYKATSEYE YDEEIDRDAW ADDEAPKPYQ APRVNIPEKT KVPEYEDY
|
| |