| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1452 |
|---|
| Symbol | |
|---|
| ID | 4245766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 2193828 |
|---|
| End bp | 2195204 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638106605 |
|---|
| Product | ABC-type branched-chain amino acid transport system, periplasmic component |
|---|
| Protein accession | YP_721215 |
|---|
| Protein GI | 113475154 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.691281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTTG TTTGGAGATA TATTTTAGAC ATGACTTTAG AAAAAAAAAC AGATCACCAA
CGAAATTTAG GTCCCACCAT CTTAGCTGGT TGTATGGGCT TTATGACTAT TTTTGCTTGG
GCTTGTAGTC CGAACCCTTT TAAACCCCTC ACTCTTAATG TTGAATTAAC TGAAAATGTA
GGTTCAAAAA ATTCAGATCA TACAATTTCC ACAGAAGGAA TTACTGAACA AACAATTCGA
CTAGGTTCTG TCCTCGCTTT AGAAGGACAA GAAGAGATTT TAGGCAATAG AATGAAATCT
GGCTTAGAAG CTGCACTTGA TGGTCAATTA GTACAGGAAA AAAAAATTCA ATTAATCTTT
AAAAATGATT ATTATGAGCC TTTAGTTGCT CGTAAAAAAG CACAAAGGTT GATTAAGTCT
GGAATTTTTT TGATGATTGG AAATGTTGGT ACACCGACCG CAAAAGAAAC ATTGCCAATT
TTAAAGAAAA ACAATGTTCC TGCCGTTGGT TTTTTTACAG GTTCTGAACT TTTGCGTTCG
CGATCTGAAC TAATCATTAA TTATCGTGCG ACTTATGCAG AGGAAATAGA AGCTGTGGTA
AAAATCGCTT TAAATGCTGG GGTAAAACCC TATGAAATTT GTGCTTATGT TCAAGATGAC
AGCTATGGAA TGTCAGGATT AAAAGGGCTT ATATATGCTT TAGTAAAAGC AGAAGTTGAT
CAGAGTATAT TACGCCCATA TGAAAAAGTT TTAGAGTATA AAGAAAAAGG AAATCAAGGC
AATTCTTTAC TTGGCCCCAT AGGGTTTTAT CCCCGTAATA CTCCCTATAC AAAGGAAGGT
TATAACTCAT TAAAACAGTG GGAAAAAAAT ACGGGAATAA ACTGTAGATT AGTCGTAACA
GCAGCAACTT CTACTAATGC TGCACGATTT ATTAATGTAG CTAAAAAGGA AGGAGAGCCT
TGGGTTATTT CCTCACTATC ATTTGCCCAT AAAGAAGAAT TACAGTTTGA TTTAGAAGAA
TACGGGATCA CAGATCAAGT AATTATTACA GAAGTTGTTC CTCAATTAGA TTCTGATCTA
CCTATTGTTC AGGAGGCAAA ATCTAAGCTA AATAGTAAGT TTGATCATGT ATCTTTAGAA
GGATATATTA TAGGAAAAAT GACTTTAAAA ATTCTCAAAG CAATACCAGG AGAAATCAAT
CGTGAGAGTT TTTTAAAACA AGCTGCTATG TCAAAGTTTG ATTTAGGTGG TGTTGTAATT
GATTTTACTA AAGGTCTAAA TAATTCCTCT AATCTAGTTT TAATAAGTAT TTTAACTCCT
CAAGGATTTA AAGATTTCCA TAAATATGAT TCAGAAAAAT TGTTCAATAA TTATTAA
|
|---|
| Protein sequence | MFLVWRYILD MTLEKKTDHQ RNLGPTILAG CMGFMTIFAW ACSPNPFKPL TLNVELTENV
GSKNSDHTIS TEGITEQTIR LGSVLALEGQ EEILGNRMKS GLEAALDGQL VQEKKIQLIF
KNDYYEPLVA RKKAQRLIKS GIFLMIGNVG TPTAKETLPI LKKNNVPAVG FFTGSELLRS
RSELIINYRA TYAEEIEAVV KIALNAGVKP YEICAYVQDD SYGMSGLKGL IYALVKAEVD
QSILRPYEKV LEYKEKGNQG NSLLGPIGFY PRNTPYTKEG YNSLKQWEKN TGINCRLVVT
AATSTNAARF INVAKKEGEP WVISSLSFAH KEELQFDLEE YGITDQVIIT EVVPQLDSDL
PIVQEAKSKL NSKFDHVSLE GYIIGKMTLK ILKAIPGEIN RESFLKQAAM SKFDLGGVVI
DFTKGLNNSS NLVLISILTP QGFKDFHKYD SEKLFNNY
|
|---|
| |