| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1441 |
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| Symbol | |
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| ID | 4245755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2179545 |
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| End bp | 2181449 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638106598 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_721208 |
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| Protein GI | 113475147 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACTC ATAATTCATC AAATTCAGCT GTTCAAGAAA AACTTAGATC CATAGAAAAT
TTACAAGAAA ATACTAAAAC AGAATTATAT CAAGAGGAAA AAAATACGAT TCCTCAATGG
TATCGATCTG ACAAAAAGAA TTTTTCTGTT CTACTTTTGG CAACAATAAT TACTACAACT
CTCGGAGTAG GATTCGTGGG AGGACAATGG TGGCAATCTC ATAGCAATAA AACACCAAAC
GAAACATCAG CAGTACCGCC AAGTAGACGA AGAAGTACTC TGGTTAAAGT AATGCCAATA
AAAACTATCT CCCTCCAAGA AACTTCAGAA TTTGTGGGAA CGATGGAGGC AACGCGGTCT
ATTAAAATTA AGCCAGAAAT AGATGGTAGG GTGGTAGAAA TTTTAGTAAA GGAAGGAACT
TTTGTCTCTG AAGGGCAGGC GATCGCTAAA CTCAAAAGTG ATAATGTGGA AGCCAACTTA
AAGAGAGCCA AAGCTAACCT CCAACAAAGT GAAGCACGTT TAGCACAACT GAGAATAGGA
GCAAGACCAG AAAAAATTGC AGCAGCTAGA GCCCGTCTCC AACAATCTCA GGCTAGGTTG
GCTGAAATGA AAAGAGGCAC GCGACCAGAA AAAATTGCAG CAGCCAGAGC CCGTCTCCAG
CAATCTCAGG CTAGGTTAGC TGAACTGCGG GCGGGTACTC GTGATGAAGA GATTGCTCAA
GCAAAAGCAG AATTACAAGA GGCAAAAGTA CGATTAGAAA ATGCTAGATC CGGTGGTCTT
TTAGAAGAAA TTGCCCAAGC AAAAGCGCAA ATAAAAGTAC AACAGGCAGA ATTAGAATTA
GCTAGTGAAC AAGTCAAGCG AAACCAAAAC TTAAGAGCAG AAGGAGCGAT CGCTGAGTTA
ACTTTTCAGG AAATTTTTCA AGAAGAGAAA GCAGCTCAGG CAAGGGTAGA AGAAGCAAAA
AGACGAGTGA CGCAATTGCA AAGAAATAGA GAATCTACAA TTCAAACATT AGAAGCAGCG
GTAGAACAAC AACGCCAGAT ATTGAGAAGG CTAAAAAATG GTACTCGCCC TGAAGAAATT
ACTAGGGTAG AGGCGGAGGT AGGGGAGGCT CGCAATAATT TAGAGGAGTT GCAAAATGGC
ACTCGCCTTG AAGAAATTGC TAGGGCAGAG GCGGAGGTAG CGGAGGCTCG TAGTAATTTA
GAAGAGTTGC AAAATGGCAC TCGCCCTGAA GAAATTGCTG AGGGCTTGGC AGAGGTAGCA
GCAGCATTAG CAGAGGTAGA TAGTTGGCAG GCTGAGTTTG AGGAGACAGT AGTTGTAGCT
CCTTTTGCAG GTGTGATTGG AGATATGATT GTGAAGATTG GGGATTTTGT TAATGATGGT
GACATTATGA CTACTGTGAC GGCAAATCAG GTATTGAGTG TAAATTTACT AATTCCGTTA
GAGCGACTAG GAGATTTGTG GTTGGGTTTA CCTGTGGAGG TTAGGAGTCC TGAAGGTAAG
GTTTTGGGAA TGGGTAAGGT TAGTTTTATT TCTCCTACTG TTAGTGATTC TCAAACTGTT
TTGGTTAAGG TAGATGTGGA TAATAGTTCT GGAAAGTTAC AAGACGGTCA GTTTGTGCAA
ACTAATGTGA TTTGGGAGCA GCGTCAAGCT GTAGTTGTGC CGATGACAGC AGTGGGTTTT
GAAGGGGAAA CACGGTTTGT GTATTTGTTG GAGGGAGAAG GTGAAGAGCA AAAGGCAAGG
CGTCAAATAA TTGAGTTGGG TTTGGTTAAG GGTGATATGA CTGAGGTAAT GTCTGGTTTA
GAGCCTGGGG ATAATTTGAT TGTTTCGGGT TTACAGAAGT TGAATGATGG AGCTACTGTG
AAGATTTTGA ATTCAGGGAA AAGAGATGGG AAGTCAAAAT TATAG
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| Protein sequence | MLTHNSSNSA VQEKLRSIEN LQENTKTELY QEEKNTIPQW YRSDKKNFSV LLLATIITTT
LGVGFVGGQW WQSHSNKTPN ETSAVPPSRR RSTLVKVMPI KTISLQETSE FVGTMEATRS
IKIKPEIDGR VVEILVKEGT FVSEGQAIAK LKSDNVEANL KRAKANLQQS EARLAQLRIG
ARPEKIAAAR ARLQQSQARL AEMKRGTRPE KIAAARARLQ QSQARLAELR AGTRDEEIAQ
AKAELQEAKV RLENARSGGL LEEIAQAKAQ IKVQQAELEL ASEQVKRNQN LRAEGAIAEL
TFQEIFQEEK AAQARVEEAK RRVTQLQRNR ESTIQTLEAA VEQQRQILRR LKNGTRPEEI
TRVEAEVGEA RNNLEELQNG TRLEEIARAE AEVAEARSNL EELQNGTRPE EIAEGLAEVA
AALAEVDSWQ AEFEETVVVA PFAGVIGDMI VKIGDFVNDG DIMTTVTANQ VLSVNLLIPL
ERLGDLWLGL PVEVRSPEGK VLGMGKVSFI SPTVSDSQTV LVKVDVDNSS GKLQDGQFVQ
TNVIWEQRQA VVVPMTAVGF EGETRFVYLL EGEGEEQKAR RQIIELGLVK GDMTEVMSGL
EPGDNLIVSG LQKLNDGATV KILNSGKRDG KSKL
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