| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1380 |
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| Symbol | tpiA |
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| ID | 4245480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2113589 |
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| End bp | 2114314 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638106549 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_721160 |
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| Protein GI | 113475099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGAAAAA CTATAATTGC TGGTAATTGG AAAATGTACA AGACCCAACT AGAAGCTAAA
GAGTTTCTCG AGGGTTTGAT GTCTCAACTA ACAAAAACCC CCGAAGAACG TGAAGTAGTT
CTCTGCACTC CCTTCACGGC ACTAGATTTT ATGTCAAAAA TTTTGCATGG GAGTCTGATC
AGGTTAGGTG CGCAAAATGT TCACTGGGAA GATGAAGGAG CATATACAGG AGAAATTTCT
GGCTTAATGC TGAAAGATGT GGGAGTTAGT TATGTAATTG TGGGTCACAG TGAGCGCCGT
CAATATTTTG GCGAAACTGA TGAAACGGTG AATATGCGCT TAAAAGCTGC TCAGAAGCAC
GGTTTAACCC CTATTCTCTG TGTGGGAGAA ACTAAACAAC AAAGAGATTC AGGTGAGACA
GAATCACATA TATTTTCTCA GTTGGCCAAT GATTTAGTTG ATGTCGATCA AGAAAATCTA
GTAATTGCTT ATGAACCAAT ATGGGCCATT GGTACTGGTG ATACCTGTGA AGCTAAAGAA
GCTAACCGAG TTATTGGTTT AATTCGTGGT AAGTTAAATA ATTCTAATGT CACTATTCAA
TATGGCGGTT CTGTTAAACC TAATAATGTT GATGATATTA TGGCACAAGA AGAAATTGAT
GGTGCTTTAG TTGGGGGTGC AAGTTTGAAT CCCGAGAGTT TTAGTCGTTT GGTTAACTAT
CAATAA
|
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| Protein sequence | MRKTIIAGNW KMYKTQLEAK EFLEGLMSQL TKTPEEREVV LCTPFTALDF MSKILHGSLI
RLGAQNVHWE DEGAYTGEIS GLMLKDVGVS YVIVGHSERR QYFGETDETV NMRLKAAQKH
GLTPILCVGE TKQQRDSGET ESHIFSQLAN DLVDVDQENL VIAYEPIWAI GTGDTCEAKE
ANRVIGLIRG KLNNSNVTIQ YGGSVKPNNV DDIMAQEEID GALVGGASLN PESFSRLVNY
Q
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