| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0972 |
|---|
| Symbol | |
|---|
| ID | 4243227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1531676 |
|---|
| End bp | 1533391 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638106215 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_720827 |
|---|
| Protein GI | 113474766 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0508248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.318068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACT ATATATTACC AACTTTAAGT GACATTTTTG CCTCAGAAAA GTCAAATATT
GATGTTTATG CAACAAAAAT GGAACTGTCA AAAGAAAATT ACCCTCCTTC CATAACAGAG
AAAAATAAAG ATTTATATTT AAAGGCTCAA AAGGAATGGT ATAGTGCTGT TGCTACGATT
AATCAACTGC TAGAAAAGTT AGTAAGAACC TCAGATTCTC AAGATTTAAA AAATCAAGAA
ATAACAAAAA CTTACAAACA GAAAGAAATT AAAAAAACTA CTCCTGTACT AGAAAATTGG
GAATCTCAAA CTAGATCAAA ATTCCCTACT TCTAATTCCT TGCTTTCTCA TCTCAAATCA
TATCATGGAT TAGTATTATC TGGTATGACT CCTGTGTTAA CAAATCCTGC TTTAACTAGC
AGTTTTTATA CTTCAGTATT TACCAGTAAA ATATCAGAAT CTTTAGAATG GTTATCCATG
TTTAGATGGC AAAGCTTACC TTTGTTACCA CCAGCAGATC ATATTAATTC TTTACCTGCT
GCTATACCAA TATTACCTTT ATCCACTAAA GACCCGATAA CAAATGAACA GTTTTGTTTA
GTTTTAACTG CTGAATTTAG TTTGATTATG GTCTTAGGAA AAAACCAAGA TAATACACCA
GCTTTTCTAT TTTCTTTTGA GCCAGAAATA GTAAAAAAAG CATGGCTTGT CTTACAGCAA
CGAAGAGTAT TACCAAAATA TTTTGATTTC AATAATCTTG ATAAGTATCA AAGTTTTATT
CACCAATATT CTCAAAAGTT AGCTATTTTA GATGATATTT TTGAGCAGTT TTTACCTGTA
GCTCCTGACT ACAAAATAGT GATGGAGTTT AGCCGCTTAT TATTATCTAA TTTACCAATT
ACAGATACTA AAAATGAAAC ATTAGAAGTC AATATTTATA ACAAAAATGG AGAAAAGCAA
GAAGCTACTA CATCACTAAA ATCTACTATT GAAAATCTCA AGTCTCCTGA TGTGGAATTG
TTACAGGCGA TCGCTCACGA AGTTAAAACT CCTTTAGCAA CAATTCAGAC TTTAACCCGC
CTTTTATTAA AACGTCTTAA TCTAAATCAG GAACTAATGA GAAAACATTT ACAAATGATT
GATACTGAAT GTACTTCTCA AATAGAACGC TTTAACCTGA TTTTTAGAGC GGCAGAATTA
GAAAATCAGC AACCTTTAAA AGAACAACAT CCATATTTAC AATTAACAAG TATTCCTCTG
GCTCAAGTAT TTAAAAATAG CATTCCCCGT TGGCAACAAA AAGCAACTCA AAGAAATCAT
ACTTTGAAAG TTATTTTACC TCCAAAAATG CCAAGTATCA TTAGCGATCC TACTATGCTT
GACCAAGTAT TAGGAAATTT GATTGAAAAT TTCTCCCGTA ATTTAGCCCC TGGCAGTCTT
ATAAAGGTGG AAGTAATGTT AGCTGGTAGT CAACTAAAAT TACAGCTTAA GTCTGATTCT
GATATTGGTG AAAAAAGTTC TTCACCTTTT ACTAATTACA CAAAAACACC TTTGAAATCT
ATTGGTCCTT TATTAATGTT TCAACCAGAA ACAGGTAGTC TTAGTTTAAA TTTAAAAGTG
ACTAAAAATT TGTTTCAAGC AATAGGAGGA AAATTAGTGG TTCGACAAAG ACCAACTAAA
GGGGAAGTAA TGACTATTTT CTTGCCAGTT CAATAA
|
|---|
| Protein sequence | MDNYILPTLS DIFASEKSNI DVYATKMELS KENYPPSITE KNKDLYLKAQ KEWYSAVATI
NQLLEKLVRT SDSQDLKNQE ITKTYKQKEI KKTTPVLENW ESQTRSKFPT SNSLLSHLKS
YHGLVLSGMT PVLTNPALTS SFYTSVFTSK ISESLEWLSM FRWQSLPLLP PADHINSLPA
AIPILPLSTK DPITNEQFCL VLTAEFSLIM VLGKNQDNTP AFLFSFEPEI VKKAWLVLQQ
RRVLPKYFDF NNLDKYQSFI HQYSQKLAIL DDIFEQFLPV APDYKIVMEF SRLLLSNLPI
TDTKNETLEV NIYNKNGEKQ EATTSLKSTI ENLKSPDVEL LQAIAHEVKT PLATIQTLTR
LLLKRLNLNQ ELMRKHLQMI DTECTSQIER FNLIFRAAEL ENQQPLKEQH PYLQLTSIPL
AQVFKNSIPR WQQKATQRNH TLKVILPPKM PSIISDPTML DQVLGNLIEN FSRNLAPGSL
IKVEVMLAGS QLKLQLKSDS DIGEKSSSPF TNYTKTPLKS IGPLLMFQPE TGSLSLNLKV
TKNLFQAIGG KLVVRQRPTK GEVMTIFLPV Q
|
|---|
| |