| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0721 |
|---|
| Symbol | |
|---|
| ID | 4242511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1165895 |
|---|
| End bp | 1167805 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638106013 |
|---|
| Product | transketolase-like |
|---|
| Protein accession | YP_720626 |
|---|
| Protein GI | 113474565 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.953782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.877406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTG CTAGAGCAAC ATTTCCAATT AACATAGAAA GCTACAAACC TCTTTCTTTG
GACCCCACAA ATTCCATCCT TACAGATGAA CAACGACAAA CCCTCAAAGC AAATATTCAA
CTTTGTCGTG ATATGATCGT ATTTTTCACT GCCACTGGCG CTGCTAGAGG AGTAGGAGGT
CATACCGGTG GCCCTTATGA TACAGTGCCG GAAGTCATGA TTCTAGATGC TTTTTTCCGA
GGTGCAGCAG AAAAGTTTGT ACCTATTTTC TTTGATGAGG CTGGACACCG TGTAGCTACC
CAATACCTAA TGGCGGCTAT ACAAGGAGAC CTTCCCGTTG AAAATCTTGT AAATTATCGG
GCAGCTAATT CCCATCTACC AGGACATCCA GAACTAGGAC TTACTCCAGG AGTAAAATTT
AGTTCCGGAA GATTGGGACA TATGTGGCCT TACATCAATG GTGTGGCAAT GGCAAATCCT
AATAAAGCAG TATTTTGCCT TGGTTCTGAT GGTTCTCAAC AAGAGGGTAA TGATGCTGAA
GCGGCGAGAA TGGCAGTAGC ACAAAATCTT AATATTAAAT TACTCATTGA TGATAATGAT
GTGACTATTG CGGGTCATCC TTCCAACTAT TTAAAAGGTT ATGACCTCAA TAAAACTCTC
ACAGGTCACG GTATAAAAGT ACTTGAAGGA GATGGAGAAG ATTTAGATAG TCTTTACCAA
AGAATGTGTC AAGCAGTTAC GACAGCCGGT CCGATCGCTA TAGTCAATAA GCGGAAAATG
TGTGTAGGAA TAGAAGGTTT AGAAGGTTCT ATCCACGGAC ATGACGTAAT TCCTTTAAAA
TTAGCGATCG GGTACTTAAA AGATAGAGGA ATAACTGAAG CAGTTAAGTA TCTTGAAAGT
ATTGAAAAAC CATTACAAAG CTACACTTAT TTGGGGGTAA GTGACAAACT TGGTTCCAAC
CGCAATGTCT TTGGGGATAC TGTGGTATCT ATTGTTAGTG GTATGAGTGA AACAGAACGT
AGCAACCACT TGTTTATTGA TAGTGACTTA GAAGGTTCCT GCGGACTAAA ACAAATTCGT
ACAGCTTTCC CGGATCGGTT TGTTAGTGGC GGTATTATGG AACGAGGCAA CTTTTCTGCT
GCTGCGGGAT TTGGTATGGA ACCAGGTAAG CAAGGTATTT TTGGAACTTT CAGCGCTTTC
CTAGAAATGT GCATCTCGGA AATTACAATG GCGCGCTTAA ATAAATCTAA TATTTTATGC
CATTTCTCCC ATGCTGGTAT AGATGATATG GCAGATAATA CTTGTCATTT CGGTTTAAAC
AATATGTTTG CTGACAATGG CCTTGATGAT GCTTATGAAA CTCGCCTCTA CTTCCCAGCA
GATGCTAATC AAATGAAAGC TTGCGTTGAG GCAGTGTTTA CTCAATCTGG AATGCGGTTT
ATTTTTTCTA CTCGCTCGAA AGTACCAATT CTGCTTGACA GCAATGGTAA AGACTTTTTT
GGCGAAGATT ACAAGTTTAT TCCTGGAAAA GATGAGGTGA TTCGGGAAGG TACTGCTGGT
TATATTGTTA GTTTCGGTGA TGCGTTATAT CGTTCTCTTG ATGCATTAGA ACGTCTGAGG
CTCGAAGGAA TAGATGTTGG CTTGATTAAT AAACCGACTC TCAATGTAAT TGACGAGGAG
ATGTTGAGAA AGGTAGGTAC GGCTCCTTTT GTATTGGTAG TTGAAGCTTT CAATAGGCGT
ACTGGTTTGG GCAGTCGTTT CGGTTCTTGG TTATTAGAAC GTGGTATGAG TCCTAAGTTT
GCTTATATTG CTACTCACAA AGAAGGTTGT GGCGGTCTCT GGGAACAGTT TCCTCATCAA
GGAATTGGCC CTGAAGGTAT TATGAGTAAG GTTAAAGAGT TAGTCAAATA A
|
|---|
| Protein sequence | MTTARATFPI NIESYKPLSL DPTNSILTDE QRQTLKANIQ LCRDMIVFFT ATGAARGVGG
HTGGPYDTVP EVMILDAFFR GAAEKFVPIF FDEAGHRVAT QYLMAAIQGD LPVENLVNYR
AANSHLPGHP ELGLTPGVKF SSGRLGHMWP YINGVAMANP NKAVFCLGSD GSQQEGNDAE
AARMAVAQNL NIKLLIDDND VTIAGHPSNY LKGYDLNKTL TGHGIKVLEG DGEDLDSLYQ
RMCQAVTTAG PIAIVNKRKM CVGIEGLEGS IHGHDVIPLK LAIGYLKDRG ITEAVKYLES
IEKPLQSYTY LGVSDKLGSN RNVFGDTVVS IVSGMSETER SNHLFIDSDL EGSCGLKQIR
TAFPDRFVSG GIMERGNFSA AAGFGMEPGK QGIFGTFSAF LEMCISEITM ARLNKSNILC
HFSHAGIDDM ADNTCHFGLN NMFADNGLDD AYETRLYFPA DANQMKACVE AVFTQSGMRF
IFSTRSKVPI LLDSNGKDFF GEDYKFIPGK DEVIREGTAG YIVSFGDALY RSLDALERLR
LEGIDVGLIN KPTLNVIDEE MLRKVGTAPF VLVVEAFNRR TGLGSRFGSW LLERGMSPKF
AYIATHKEGC GGLWEQFPHQ GIGPEGIMSK VKELVK
|
|---|
| |