| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0685 |
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| Symbol | |
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| ID | 4242824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1118945 |
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| End bp | 1120267 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638105982 |
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| Product | OpcA protein |
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| Protein accession | YP_720595 |
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| Protein GI | 113474534 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
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| TIGRFAM ID | [TIGR00534] opcA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0954388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACAA CACTTGTTGC CTTACAACAA CCAAAAGATA TCTCTCTGGG TGAAATTGAA
GCAGAACTGA ATAAAATCTG GCTCAGTCAA GGTGGAGGCA AGGCAACTCC AATTGCTACC
AGAGCAGCAA CTTTTAGTAT GGTCATATAT GAACCCGAAG AATTCCAGCA ACTTTTAGCC
GGTTTAGGAT TCTATAAGGG TGAAATAGAT GGTGTGAACG GAATAGTAGC TCGTGAAGCT
ATTAAGGAAG CTCAAAAAGC CTATAATTTA CCAATCACAG GTAGAGTAGA CTCTGAAACT
CTTGCGAAGT TACGCTCAGA GTGGGCTACA AAGTCACTAG AAAATAGACA ATTCCCTAAT
ATAGATGTCA GGGGTTCTAG TGTTAGCGAA GTGATTGCAG CTCAAAATCC TTGTCGGGTT
ATTACGTTGT GTCCTACTTT CGGAGAAGAT ACAGGAGTAA CAGCTCAAGT TTCTGCTTAC
TGCCCAGTTC AGAAAAAGCA GTCTTCACTA ATTTGTTGTG AATATATTAC CCTACATGGA
ACTAGAGAAG CACTGGAACG GGTGAGTGAT GTAGTTACAT CGTTAATGAT TCCTGATCTA
CCAAAGTTTG TTTGGTGGAA GGCAACTCCC AACCGAGAAC AGGAGCTTTT CCGTCGCCTA
TGCAAAACTA GCAACTGTAT TATTCTAGAT TCTTCTTATT TTAGTGATCC AGAATCAGAA
TTTCTCAAAA TGCTGGAGTT GATTGAAAAT AAAACCTATA TTGCTGACTT AAATTGGCAT
CGTCTTTCTG CATGGCAAGA GTTAACTGCT GCCACTTTTG ACCCGCCAGA GCGTCGTGCT
TCTTTAGGTG AAATTGATAC TATTACTCTT GATTATGAGA AAGGTAATGT ATCTCAAGCG
TTAATGTTTT TGGGCTGGTT TGCTAGTCGT CTTGATTGGC AACCTACAAC TTATACTGAA
ACTGGTGGTG ATTATGACAT CATTCATATT AAGTTTATTG GTCCTAACAA TAAAGAGATT
TTAGCAGAGT TGGCAGCAAT TTCTACTACT GACTATGGTG AAATACCTGG AGATTTAGTG
GGCTTGCGTT TGGATTCTAG TAATCCTAGT GCAGATTGTT GTACTATTTT GTGTTCTGAA
ACTACTGGTT GTATGCGATT AGAGGCTGGT GGTAGTGCTC AATCTTGTCG TACAGAGCAA
GTCAGTGCTT TAAGCGATCA GAAGGCGGAA TATTTGATGG CTCAACAGTT ACAACGTTGG
GGACGAGAGG TTTTGTATGA AGATAGTTTA GCTGTAACTG TTGAAATTCT CAAATTGCGT
TAA
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| Protein sequence | MSTTLVALQQ PKDISLGEIE AELNKIWLSQ GGGKATPIAT RAATFSMVIY EPEEFQQLLA
GLGFYKGEID GVNGIVAREA IKEAQKAYNL PITGRVDSET LAKLRSEWAT KSLENRQFPN
IDVRGSSVSE VIAAQNPCRV ITLCPTFGED TGVTAQVSAY CPVQKKQSSL ICCEYITLHG
TREALERVSD VVTSLMIPDL PKFVWWKATP NREQELFRRL CKTSNCIILD SSYFSDPESE
FLKMLELIEN KTYIADLNWH RLSAWQELTA ATFDPPERRA SLGEIDTITL DYEKGNVSQA
LMFLGWFASR LDWQPTTYTE TGGDYDIIHI KFIGPNNKEI LAELAAISTT DYGEIPGDLV
GLRLDSSNPS ADCCTILCSE TTGCMRLEAG GSAQSCRTEQ VSALSDQKAE YLMAQQLQRW
GREVLYEDSL AVTVEILKLR
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