Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0666 |
Symbol | |
ID | 4242805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1094074 |
End bp | 1096749 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638105965 |
Product | Na-Ca exchanger/integrin-beta4 |
Protein accession | YP_720578 |
Protein GI | 113474517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATG ATGGGTGTAC TTTTCCAGAT GTCACTTTTA CTGTCCCAGA TGTCAATTTT ATGGCCCAAG TTTCTGTGGA ACCACTAGGG GCTATGGGGA TAATTGAAGA GGGGTGGAGT GAGGTTCGGA ACAATTTAGC TGAGTTTGCT AGTTCTGAGA CTTTTGAGAG GGATATGTTG AGTGTCTTTG GGGAGTCTAC AAATGTTGAT TTGGGAAGGA CTATTATTGA TGCTTTGGTA AAGGGTGAGG ACTGGCCACA GATAAATGTT GTGCCAGCAG CACTGATGAA TGGTGCGGCA GGAGGTTTTG ACCCTCTGAC TGGTGAGGTG TATTTAGGGG ATAGTTTGGT TGAGCCATTG TCTGTTGTGG GGAGTGAAAC AAGGGAGTTT GATCTAGTTG GTGTACTTAC CGAGGAAATA GCACACTCTA TTGAGTGGAA GTTAAATCTC ACAGATACTC CAGGAGATGA GGGGGAGTAT TTGGCAGCGT TGGTGAATGG GGATGAGTTG AGCGAGGGGG AAATTGCTCG GTTGCGGGGT GAGGATGATA GGAGGGAGAT TTTAAATGGA ACGGTTATAG TGGAGGCTAA TTCAGATTTG ACTTTTGAGA CTCAAACTTT CCCAACGGGT GATCAACCTC TAGGGATGGC AGCAGCAGAT TTTAATCAAG ATGGGTTTCA GGATATTGTA GTAGCAAACA TTGGAGTAGC AAATGGCATA TCAATCTTTT TGGGTGATGG TAAAGGAGGA GTGTTAACTG CATTCTTATC TAAATTAGAA GGTGTTGTGC CCGCTCTCGT TACAGTAGGA GATATGAACC GAGACGGCAA CCAGGATATC GTGACGGCAA ATTTCAGGAA CGATAGCGTG ACAGTGTTGT TTGGAAATGG GAAAGGTCAG TTTAGCAGTT CTAGCAATTT TGCTGTAGGC GATAATCCAT TAGAATTAGC GGTAGCAGAC GTAAACCGAG ACGGCAACCT GGATGTCGTT ACCCCTAATT ATTACTCTAA CGATGTCTCT GTATTGTTGG GCAATGGGGA TGGTACTTTT ATGAGCGCTA CGAATTTTAC AACAGGAGGC TCTAAGCCTG AGGGCGTAGT TATTAAAGAT ATCAATGGAG ACCGCAACCC GGATATTATG GTAAGTAATG TTGACTCTGC TACCGTTGCT GTCCTGCCAG GAAATGGAGA TGGTACTTTT GGCTTGCCTA CTAGTTTTCC GGCAGGAGGA AAAGTTTATG GTATAACAGG GAAGGACTTG AACCGAGATG GGAAACTCGA TCTTGTCTTA CCCACATTAG ATCCAGATGG TGTTTCGGTA ATGTTGGGTA TAGGAAATGG ATTTTTTGCT TTTCCCACGA ACCTTCCAGT AGGTTCTCTA CCAGAACATG TTGCCATTGA AGATTTGAAT GGCGATCGCC AACTTGATCT TGTTGTCATA AACAGAGGGT CTGATAATAT CTCCGTATTA CTGGGAAAAG GGAAAGGACT TTTCGAGCCT GCGATTAATT TTGGGGTGGG AGAAGGGCCC AATATCGTTG TAGTAGAAGA CTTTAATAAT GATGGCAAAA AAGATATTGC TGTAACAAAC AGTGAAGCTG ATACCATCTC CATCTTAACT AATACCAGCA AAATTGCAGT CGCCGACCCC AACATTACCA TCTCTGACAC CAGAATAACT GAAGGCAACA AAGGCAGGAA AAATGCTAAA TTCACTGTCA CTCTCGACGA CGCAAGCAAT AAAACAGTCA AAGTCAACTA CGCAACTGCT AATAGTAGCG CCAAAGCCGG AAAAGATTAC CGGAAAACCA CTGGTACTCT CACATTCAAA CCTGGTCAAA CCCAAAAGAA AATCAATGTT CCTATCTTCG GCGACACTAT AGTCGAAAAA AACGAAAAAT TTCAGCTCAA CCTCAGCAAA CCCAAAAATG GGAAAATCAA AGATAAACGC GGCATTGCCA CCATCCGCAA CGACGATAAA AATCAGCCCC TGCTATCTAT TGGCGACGCT CAAATAACTG AAGGGGACCA GGGCAAAAAA CAACTAAAAT TCGATGTCAC CCTCAACACC AAAGTCAAGA AAAGAGTTGA AGTTAATTAC GCCACCGCGG ACATGACTGC CAAAAAAGGT TCCGACTACC AACAAACCAA GGGCAAACTC ATTTTCAAAC CTAACCAGAA GAAAAAGACT ATAACAGTTC CCATCCTGGG GGATACTCTC AACGAAGACG ACGAGAAATT TAGAGTCAAC CTTAGCAGAC CTAAAAATGC TAAACTGAGA GATAAACGTG GAGTTGGTCT TATTAAAGAT AATGATCGGG GTGGAGACCA ACCAGGAGAT AGTTTTGAGA CAGCGATCAA CTTAGACATA CTCACAGGGG AACAGGTTGT GAGTGACACA ATTGGTTTTA CTGAGGGAAT AAAGCGGGAT ACAAATGACT ATTTCCGTTT CCAAACAGAT AAAGAAGGTA CTTTTGTGTT GGTTCTTGAT GATCTGTTAA AAAATGCTGA TGTTGATCTA TATGGTAGTG AGCAAGAATT GATTAACCAG TCGAAAAATA AGGGTGTTAA GCCAGAAAGT ATTAGTACCA TATTAGACCC AGACACTTAT TTTCTGCGGG TATATCCCCA AGGCAGCAGT CGCACAAACT ACCGTCTCAG CGTTGATTTA TTGTAG
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Protein sequence | MIDDGCTFPD VTFTVPDVNF MAQVSVEPLG AMGIIEEGWS EVRNNLAEFA SSETFERDML SVFGESTNVD LGRTIIDALV KGEDWPQINV VPAALMNGAA GGFDPLTGEV YLGDSLVEPL SVVGSETREF DLVGVLTEEI AHSIEWKLNL TDTPGDEGEY LAALVNGDEL SEGEIARLRG EDDRREILNG TVIVEANSDL TFETQTFPTG DQPLGMAAAD FNQDGFQDIV VANIGVANGI SIFLGDGKGG VLTAFLSKLE GVVPALVTVG DMNRDGNQDI VTANFRNDSV TVLFGNGKGQ FSSSSNFAVG DNPLELAVAD VNRDGNLDVV TPNYYSNDVS VLLGNGDGTF MSATNFTTGG SKPEGVVIKD INGDRNPDIM VSNVDSATVA VLPGNGDGTF GLPTSFPAGG KVYGITGKDL NRDGKLDLVL PTLDPDGVSV MLGIGNGFFA FPTNLPVGSL PEHVAIEDLN GDRQLDLVVI NRGSDNISVL LGKGKGLFEP AINFGVGEGP NIVVVEDFNN DGKKDIAVTN SEADTISILT NTSKIAVADP NITISDTRIT EGNKGRKNAK FTVTLDDASN KTVKVNYATA NSSAKAGKDY RKTTGTLTFK PGQTQKKINV PIFGDTIVEK NEKFQLNLSK PKNGKIKDKR GIATIRNDDK NQPLLSIGDA QITEGDQGKK QLKFDVTLNT KVKKRVEVNY ATADMTAKKG SDYQQTKGKL IFKPNQKKKT ITVPILGDTL NEDDEKFRVN LSRPKNAKLR DKRGVGLIKD NDRGGDQPGD SFETAINLDI LTGEQVVSDT IGFTEGIKRD TNDYFRFQTD KEGTFVLVLD DLLKNADVDL YGSEQELINQ SKNKGVKPES ISTILDPDTY FLRVYPQGSS RTNYRLSVDL L
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