Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0613 |
Symbol | |
ID | 4241984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 993008 |
End bp | 994957 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638105917 |
Product | response regulator receiver protein |
Protein accession | YP_720530 |
Protein GI | 113474469 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0340675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTG AATCAGCATT AAAATTGCTG CTCATCGATA ATGACCCTAT CTTTCGGATG GGGTTAAAAT TTTCCTGTGA GCAGTTTTCG GATATAGAAA TAGTAGTTGA GACAGAAGTA GGCTCAAAAG CATTAAAAAT TATTCACTCT TTGAACACAC AAGAGAATAA TTTTTTGGTA ATTCTAGACA TAGAAACCAA TAATTTGCTT CCTCAAACTA CAGAGAAAAT TACAATTTCT GGAATTGACT TTTGTCAACA ACTTAAAATT TCGTACCCAG AATTACCAAT ATTATTATTA ACATATCTAC AAGATAACCT ATTATTGACA TTAGTAAAAA ATTTAGGTGT TAATGGTTAT TGTCCAAAAG GAATCAGTAT TTCTGAGTTA ATAATTATTA TTAGAAAAAT AGGGTCCGGC CAATATCATT GGCAAAATAT TATTGGGGTT GAAGCTATAG AAGAAAACTC TAATAAACTA GCAAATTTAA ATTCAAGAGT GCAAATAAAA AAAATTTTTA ATAATATTTT TGGTAACATC TGCAACTCGG GGATAAAACA AATAGATTCT GCTCTCTCAG AAGTAACATC TCAACTGAAT GAAAGAGAAA AAAAATTAGA TATCAACAAT TTAACTTCTC TACTCAATAT GGCAATAACT TCTGGGCAAC GCCGAGAATT GCTAACAGCT AGATGGATAC TAATTCAATT TTCAAGTCAG TCTTTTAATA CTTATAATAA ACAGGAGCAA ATAGATTTAA ATGAAGATAA TTTTGACTAC TCAAAAACAC AAAATATTAC CGATTTACAA ACTAATAAGC TCATTGGTTT AGTTAACAAT AATCGGGAAA CTTTTCTGAA TACAAATGCA GAAGTTATTT CCCAAACTTC CACTGATAAA AGCAATGTAC AAACAGCAGT ATTTGAAGCA ACAGTAGCTA AATTAAATTC TAATTTAATC AACTTCAGTG GGTTACCTAT GGAAATTGAT ATATTGCGAG GTTCTAAGAA AAAAGAACTA ATTTATATAG CTTTATGTAA GTTTGAAGAT CTTCTTGATG AACTACGTAG TGCTTCTACT CTGAAGGAAG AAATCATAAA AAAGAGATAT GATATTGTAC ATAATTTGTG GGAATTAACG AGCCAGTTTT TTTGGGATGA ATACCATAAA TTAGAAATCA GTAATAGCAT AGAATTAGTC AATTGTTTTT CAGAAAAAAT TAGAGTAGAA GTGATGCCAG TCTTATTAAA CGAGGCGGAT AATGTACATA AGTTTATTCT TGATAAAATT CCTTTAGTTG AAGAATTAAT AGCTTACTTA TTATTTGAAG TTCCTTTGTT AGTTGATAAT GTATCTTTTG CCGTAGGTAC TCCTGAAGCT ATGGAACGTT CTGAAGCTTT ACTGCAAAAT TTATTAATTT CAGTTGCTAA CAGTGTTATC CAACCTTTAT TAAATAATTT TGCCCATGTA GAGGAAATTA AAAAATATTT TTATGATCAA CAATTATTAT CCACACGAGA TATTGAAAAG TTCAGAAATC GCTTATCTTG GAAATATCGC ATAGAACAAT ATATAGAGGA ACCAAAAGCA ATTTTTGAGA GTAACTTTTT CTTATTTGTG TTAAATGAAC GTGGCATTAA AAGAATATCT ATTTATTCAC CCCGTAGACA TGAATTAGGA AAACTATCAG GGATTCCATT AACAGTAACA TTACTTTTAG AAACTCGTGA TGCAATAGCT CCTGGTATTA GAGGAACTAT TTCTTTTATT GGCAGTGGAG TTGTGTATTT ATTAACTCAA GTAATTGGGC GTGGTATAGG TTTAATTGGA AGAGGTATTA TTCAGGGCGT GGGTAGTTCT TTTCAAGATG CTAGATTTGG TAAAAATAAT AATATGGGAC AAACAAGAAG AAATCATGAA CAAAGCAGAA GGCAGAAAGG GAGTATCTAG
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Protein sequence | MNSESALKLL LIDNDPIFRM GLKFSCEQFS DIEIVVETEV GSKALKIIHS LNTQENNFLV ILDIETNNLL PQTTEKITIS GIDFCQQLKI SYPELPILLL TYLQDNLLLT LVKNLGVNGY CPKGISISEL IIIIRKIGSG QYHWQNIIGV EAIEENSNKL ANLNSRVQIK KIFNNIFGNI CNSGIKQIDS ALSEVTSQLN EREKKLDINN LTSLLNMAIT SGQRRELLTA RWILIQFSSQ SFNTYNKQEQ IDLNEDNFDY SKTQNITDLQ TNKLIGLVNN NRETFLNTNA EVISQTSTDK SNVQTAVFEA TVAKLNSNLI NFSGLPMEID ILRGSKKKEL IYIALCKFED LLDELRSAST LKEEIIKKRY DIVHNLWELT SQFFWDEYHK LEISNSIELV NCFSEKIRVE VMPVLLNEAD NVHKFILDKI PLVEELIAYL LFEVPLLVDN VSFAVGTPEA MERSEALLQN LLISVANSVI QPLLNNFAHV EEIKKYFYDQ QLLSTRDIEK FRNRLSWKYR IEQYIEEPKA IFESNFFLFV LNERGIKRIS IYSPRRHELG KLSGIPLTVT LLLETRDAIA PGIRGTISFI GSGVVYLLTQ VIGRGIGLIG RGIIQGVGSS FQDARFGKNN NMGQTRRNHE QSRRQKGSI
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