Gene Tery_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0613 
Symbol 
ID4241984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp993008 
End bp994957 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content30% 
IMG OID638105917 
Productresponse regulator receiver protein 
Protein accessionYP_720530 
Protein GI113474469 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0340675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTG AATCAGCATT AAAATTGCTG CTCATCGATA ATGACCCTAT CTTTCGGATG 
GGGTTAAAAT TTTCCTGTGA GCAGTTTTCG GATATAGAAA TAGTAGTTGA GACAGAAGTA
GGCTCAAAAG CATTAAAAAT TATTCACTCT TTGAACACAC AAGAGAATAA TTTTTTGGTA
ATTCTAGACA TAGAAACCAA TAATTTGCTT CCTCAAACTA CAGAGAAAAT TACAATTTCT
GGAATTGACT TTTGTCAACA ACTTAAAATT TCGTACCCAG AATTACCAAT ATTATTATTA
ACATATCTAC AAGATAACCT ATTATTGACA TTAGTAAAAA ATTTAGGTGT TAATGGTTAT
TGTCCAAAAG GAATCAGTAT TTCTGAGTTA ATAATTATTA TTAGAAAAAT AGGGTCCGGC
CAATATCATT GGCAAAATAT TATTGGGGTT GAAGCTATAG AAGAAAACTC TAATAAACTA
GCAAATTTAA ATTCAAGAGT GCAAATAAAA AAAATTTTTA ATAATATTTT TGGTAACATC
TGCAACTCGG GGATAAAACA AATAGATTCT GCTCTCTCAG AAGTAACATC TCAACTGAAT
GAAAGAGAAA AAAAATTAGA TATCAACAAT TTAACTTCTC TACTCAATAT GGCAATAACT
TCTGGGCAAC GCCGAGAATT GCTAACAGCT AGATGGATAC TAATTCAATT TTCAAGTCAG
TCTTTTAATA CTTATAATAA ACAGGAGCAA ATAGATTTAA ATGAAGATAA TTTTGACTAC
TCAAAAACAC AAAATATTAC CGATTTACAA ACTAATAAGC TCATTGGTTT AGTTAACAAT
AATCGGGAAA CTTTTCTGAA TACAAATGCA GAAGTTATTT CCCAAACTTC CACTGATAAA
AGCAATGTAC AAACAGCAGT ATTTGAAGCA ACAGTAGCTA AATTAAATTC TAATTTAATC
AACTTCAGTG GGTTACCTAT GGAAATTGAT ATATTGCGAG GTTCTAAGAA AAAAGAACTA
ATTTATATAG CTTTATGTAA GTTTGAAGAT CTTCTTGATG AACTACGTAG TGCTTCTACT
CTGAAGGAAG AAATCATAAA AAAGAGATAT GATATTGTAC ATAATTTGTG GGAATTAACG
AGCCAGTTTT TTTGGGATGA ATACCATAAA TTAGAAATCA GTAATAGCAT AGAATTAGTC
AATTGTTTTT CAGAAAAAAT TAGAGTAGAA GTGATGCCAG TCTTATTAAA CGAGGCGGAT
AATGTACATA AGTTTATTCT TGATAAAATT CCTTTAGTTG AAGAATTAAT AGCTTACTTA
TTATTTGAAG TTCCTTTGTT AGTTGATAAT GTATCTTTTG CCGTAGGTAC TCCTGAAGCT
ATGGAACGTT CTGAAGCTTT ACTGCAAAAT TTATTAATTT CAGTTGCTAA CAGTGTTATC
CAACCTTTAT TAAATAATTT TGCCCATGTA GAGGAAATTA AAAAATATTT TTATGATCAA
CAATTATTAT CCACACGAGA TATTGAAAAG TTCAGAAATC GCTTATCTTG GAAATATCGC
ATAGAACAAT ATATAGAGGA ACCAAAAGCA ATTTTTGAGA GTAACTTTTT CTTATTTGTG
TTAAATGAAC GTGGCATTAA AAGAATATCT ATTTATTCAC CCCGTAGACA TGAATTAGGA
AAACTATCAG GGATTCCATT AACAGTAACA TTACTTTTAG AAACTCGTGA TGCAATAGCT
CCTGGTATTA GAGGAACTAT TTCTTTTATT GGCAGTGGAG TTGTGTATTT ATTAACTCAA
GTAATTGGGC GTGGTATAGG TTTAATTGGA AGAGGTATTA TTCAGGGCGT GGGTAGTTCT
TTTCAAGATG CTAGATTTGG TAAAAATAAT AATATGGGAC AAACAAGAAG AAATCATGAA
CAAAGCAGAA GGCAGAAAGG GAGTATCTAG
 
Protein sequence
MNSESALKLL LIDNDPIFRM GLKFSCEQFS DIEIVVETEV GSKALKIIHS LNTQENNFLV 
ILDIETNNLL PQTTEKITIS GIDFCQQLKI SYPELPILLL TYLQDNLLLT LVKNLGVNGY
CPKGISISEL IIIIRKIGSG QYHWQNIIGV EAIEENSNKL ANLNSRVQIK KIFNNIFGNI
CNSGIKQIDS ALSEVTSQLN EREKKLDINN LTSLLNMAIT SGQRRELLTA RWILIQFSSQ
SFNTYNKQEQ IDLNEDNFDY SKTQNITDLQ TNKLIGLVNN NRETFLNTNA EVISQTSTDK
SNVQTAVFEA TVAKLNSNLI NFSGLPMEID ILRGSKKKEL IYIALCKFED LLDELRSAST
LKEEIIKKRY DIVHNLWELT SQFFWDEYHK LEISNSIELV NCFSEKIRVE VMPVLLNEAD
NVHKFILDKI PLVEELIAYL LFEVPLLVDN VSFAVGTPEA MERSEALLQN LLISVANSVI
QPLLNNFAHV EEIKKYFYDQ QLLSTRDIEK FRNRLSWKYR IEQYIEEPKA IFESNFFLFV
LNERGIKRIS IYSPRRHELG KLSGIPLTVT LLLETRDAIA PGIRGTISFI GSGVVYLLTQ
VIGRGIGLIG RGIIQGVGSS FQDARFGKNN NMGQTRRNHE QSRRQKGSI