| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0608 |
|---|
| Symbol | |
|---|
| ID | 4241979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 984446 |
|---|
| End bp | 985642 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638105912 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_720525 |
|---|
| Protein GI | 113474464 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.160271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTT ATGAAAATAG CAACAATAAA CTTTTTGATG TGTTTCTCAA TGACATACCC
GATAAATTTA CAGGAAAGTT AGAAGTAAAA AGTTCTCGCC AAAGTTGGAC AATATTTTTG
TGTATCGGTC ATCTAGCTTG GGCAATAGGT GGCAAACATT ATAATCGGAG ATTTTACAAA
ATATGGCATC AATTTTGTTC AAATGTTCCT CTAGAAAAGA TTAAATTAGG AAAACAAGAT
ACTCTTTTCT GTGATTACTA TCATATCATG TCTGTTTTAT CGAGGCGAAA AATATTAACT
ATCCCTCAAA TAAAAGCAGT AGTATTGGGA AACTTAGAAG AAGTTTTATT TGATATTTTA
CAGGAGGAAT CACAAGAAAA ATTAACATAC GATGTATCCA ATTCTGGATT CGACAAAACT
TCGACCATAA TTTCTTCAAT TGTTAGATTA GAAACTGTTA TTTCTCGAGT TAATAAGTTG
TGGAAAAATT GGCAAAATTC TAATTTAGCT GCATATTCTC CTAACTTAAT TCCTACAATT
ATCAACTATG AAAAGTTACA AAAAATAGCC AAAAATAACA CTTATAAGAC AATTACTAAG
TTAGTTGATG GCAAAAAATC ACTGCGAGAA ACTGCTGTCT TGTTCAAAAA AGATGTGCGG
GAGCTAACTT TGTTTTTAAT TCCTTATGTT AAGAATAAAT TAATTCACTT CAAAGAAGGA
GCAGACAAAA AAAATCTAGA GAGAAGTACT CAAGATGTGC ATAAAAAAAC AATACCCAAG
CAATCTCAAG CATTAATTAT TTGTGTAGAT GATAGTAAAG AAACTTGTTA TATCTTAGAG
AAAATAATTA AAAAAACGGG TTATAAATTT ATGGGAATTC AAGATTCTAT TAAAGCATTA
TTTATGATTA TTGAATCTAA ACCGGATCTA ATTTTCTTAG ATTTAATGAT GCCAATTGCC
AATGGTTATG AAATTTGTAC TCAACTGCGA AGAGTGCCTA TGTTTGAGAA TACACCAATA
ATTATATTAA CTGGGAGTGA TGGAGTTGTA GACCGAGTTC GAGCGAAAAT GGTAGGGGCT
ACAGGGTATT TGACTAAACC TATTGAACCG AAAAAAGTTT TAGCTTTAGT CAAGAATTAT
TTACAAAATC CTCGCTCTCC TGATACTCAA ATTAAATCTG ATGAATCAGA TTTATAA
|
|---|
| Protein sequence | MTSYENSNNK LFDVFLNDIP DKFTGKLEVK SSRQSWTIFL CIGHLAWAIG GKHYNRRFYK
IWHQFCSNVP LEKIKLGKQD TLFCDYYHIM SVLSRRKILT IPQIKAVVLG NLEEVLFDIL
QEESQEKLTY DVSNSGFDKT STIISSIVRL ETVISRVNKL WKNWQNSNLA AYSPNLIPTI
INYEKLQKIA KNNTYKTITK LVDGKKSLRE TAVLFKKDVR ELTLFLIPYV KNKLIHFKEG
ADKKNLERST QDVHKKTIPK QSQALIICVD DSKETCYILE KIIKKTGYKF MGIQDSIKAL
FMIIESKPDL IFLDLMMPIA NGYEICTQLR RVPMFENTPI IILTGSDGVV DRVRAKMVGA
TGYLTKPIEP KKVLALVKNY LQNPRSPDTQ IKSDESDL
|
|---|
| |