Gene Tery_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0415 
Symbol 
ID4241920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp650769 
End bp652265 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content33% 
IMG OID638105737 
Producthypothetical protein 
Protein accessionYP_720351 
Protein GI113474290 
COG category[S] Function unknown 
COG ID[COG3463] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.789549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTT TGCCACCACT TATTGTGAGC AGGATAATAA TTCTAGCAAC TTTAATTTTC 
TTTATCTGTA GTAGTTTACG TCACGCCTTC TTTTGCTCTA CTGGGTTTGA CTTGGGTATT
TATGACCAAG TTGTATATTT GATTAGTCAA GGAAAATCTC CCATTTCTTC TTTTTTGGGA
TATCACCATT TGGGAAATCA TGCTGCTTGG GCTGTCTATC CTTTAGGATT ATTTTATATG
ATTCATCCTG ATATTCATTG GCTACTCTTA CTACAAGCTG TATGTTTAGC CTTAGGAAGT
TGGCCTACTT GGTGTTTGGC CAGATTAGCA GGGTTAAATC AAGGACAAGC AGTAGCGATC
GCCATTTCCT ATCTTTTATA CCCAGTAATT TTTAATATTA ATTTATTTGA TTTTCACCCA
GAAGTAATGG CTTTACCTGC TATTTTAGGA GCAATTTTAG CAGCGAGACT AAAACGTGTT
TTATGGTTTT GTATAGCTAT TATTTGGGTA TTAGGTTGTA AAGCAGTTTT ATCATTAACT
ATAGTTTTTA TGGGTTTCTG GTTACTCGCT TTTGAAAAAC GTAAGTTTTG CGGTTTAATT
GCTATTTTTT TAGGCATTTT ATGGTTTATA GTTGTAACTC AAGGAATTAT TCCTTTTTTC
AGTGGTAAAG AAGTAGCTGG AGTCGGGCGT TATAGTTATC TGGGAGATTC TGTTGTGGGA
ATTATAATTA ATATTTTCCT ACAACCAGGA GTAGTGTTAG GCAGAATATT ATCTTGGGAA
AGTATCAAAT ATATTTTTCT GTTATTTTTA CCTGTAATTT GGGGAATATT TCCATTACTT
CAGACAAATA AGGCTGTTTT ACCTAATCTT ATCCCTCTCA TTCCAACTAT TCCGACAATT
ATCTTGAATG CTCTGTCTGA AGTATCATTT CAGAAAAGCT TAAATTATCA GTATTCTTTA
CCTGCAATTA GTTTTTTATT ATTAACAATA ATTTCCTGTC TAGCAGCAGC TTCTGAAATA
GAAAATCAAA GTATTCAGAT AAAATCAACT TGGATAATTA AGTTAGAAAT TCCTAAATTT
AATCTGAGAT TACCAATACC AAATTTTCAA TACCCCCGCA TAATTATTTT GTGGTCTACT
TTAATATTTC TGTTGTTTGG TAATGTAGCC AGTTTATTTT CTTATCCTCG TAGCTTTGAT
ACTTGGCAAG CTACCAATAA TGCAATTACT TACATTAAAA CTCAAGGTGG GGTACTCACA
GATAATCGAT TAGCACCTCA TTTTACTCAT CGTTCAATGG TCAAGTTATT GAATCAAATA
GAGCCAGATA ATTTAGATGA ATTCGATTAT GTAGTTTTGA ATTTACGTCA TCCCTGGCCA
GATACTAAGG ATACTGGTAT TATCCTTTCT AAAAATCTCC AAAACAACCA AGAATGGGAA
TTAAGTTATC AAAAAAATGA TGTAATAGTA TTTCAAAGAA AAGAATTCAA AAGTTAA
 
Protein sequence
MMLLPPLIVS RIIILATLIF FICSSLRHAF FCSTGFDLGI YDQVVYLISQ GKSPISSFLG 
YHHLGNHAAW AVYPLGLFYM IHPDIHWLLL LQAVCLALGS WPTWCLARLA GLNQGQAVAI
AISYLLYPVI FNINLFDFHP EVMALPAILG AILAARLKRV LWFCIAIIWV LGCKAVLSLT
IVFMGFWLLA FEKRKFCGLI AIFLGILWFI VVTQGIIPFF SGKEVAGVGR YSYLGDSVVG
IIINIFLQPG VVLGRILSWE SIKYIFLLFL PVIWGIFPLL QTNKAVLPNL IPLIPTIPTI
ILNALSEVSF QKSLNYQYSL PAISFLLLTI ISCLAAASEI ENQSIQIKST WIIKLEIPKF
NLRLPIPNFQ YPRIIILWST LIFLLFGNVA SLFSYPRSFD TWQATNNAIT YIKTQGGVLT
DNRLAPHFTH RSMVKLLNQI EPDNLDEFDY VVLNLRHPWP DTKDTGIILS KNLQNNQEWE
LSYQKNDVIV FQRKEFKS