Gene Tery_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0414 
Symbol 
ID4241978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp648930 
End bp650492 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content32% 
IMG OID638105736 
Producthypothetical protein 
Protein accessionYP_720350 
Protein GI113474289 
COG category[S] Function unknown 
COG ID[COG3463] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATTA TTAAACGATT AAAATCTGAT TTTATATTTC AAATAACTAT TATTGCTGCC 
ATAATTTTAT TTATCTGTAG CACAGTGCGT CACTTATTAT TTCAATCTAC TGCTTTTGAA
ATGGGAATTT ATGACCAAGT TACTTATTTA ATAAGTCAAG GTTTACCTCC AATTTCTTCC
TTTTTAGAAG TACATCATTT GGGAAATCAT GCTGCTTGGG CAATGTATCC AGTGGCATTA
TTTTATAAAA TTTATCCTTC AGTTTATTGG CTATTACTAA TACAAGCAAT TTGTTTAGCA
ATAGGAACCT TACCTACTTG GAGTTTAGCC CGTTATTCAG GGTTAAATAA AAAACAAGCT
TTTGCCATAG TAATGGTTTA TTTATTATAC CCAGTAGTGT TTAATCTCAA CTTATTTGAT
TTTCATCCAG AGGTAATGGC ATTGCCAGCA ATATTAGGAG CAATTTTAGC AGCAAAATTA
GATAAAACCG TATGGTTTTG TTTAGCTATT ATCTGGGTTT TAGGCTGTAA AGATGCCTTA
TCTTTACCTG TAGCTGCTAT GGGTTTTTGG TTATATTTCT ATGAAAAAAA GCGAGTATGT
GGTGCCATAG CTTTGTTTGC TGGTGTGACT TGGTTTATTA TCGCTACTCA AATACTAATA
CCTTATTTTA AGGATGGTCA ACCGCCAGGA GGAATAGGAC GTTATCGATA TTTAGGTAAC
TCCATACCAG AAATTTTATT GAATCTTTTT TTAAGACCTG AACTGGTGTT TGGTAGATTA
ATTTCTCTTA AAACTTTAGA ATATTTATTT TTGCTAAATC TACCGATAAT TTGGTGGCTT
GCTCCTAAAT ATTTAGCTCC TTTAATAGCT GCTTCTCCAG TTTTGGCACT AAATATTCTC
TCCGATATTG ATGCTCAACG AGATTTAATT CATCAGTATT CTTTGCCAAT ATTGCCTTTT
TTATTAATGG CTGTAATTTA TACTATTGCT GATGGTAAAT GTGGTTTATG GTATTGGCTA
TGGAATTTAC GCCGATCCCA AAAAAAAGAA GCTAAAAATA TATCTACAAT TGTTAGTCAA
CTATTACCAA AATTTATCAT AATTTGGTCT TGTATCGGAT TTTTAGCTTT AGCTAAATAT
GGTTATTTTT GGTCTATTTA CTTAGATTAT TTAGATACTT GGCAAGCTAC ACGAACTGCG
GTGAATATAA TTCAGACAAA AGGTAGTGTT TTAACTACTT CAGAAATTAC TCCTCATTTA
AGTCATCGTC AGTTTATTAA GTTAATTATT GAAGAAGAAG AATTACCTAG AGATGAAGCC
TTAGCTGAGT ATGACTATGT ATTAATAAAT GTACGTCATC CTGGTTGGAA AAGTAGTCAA
GAATATGCGC GAAAATTAGT AGATAAACTC AAGGTTAATT CAGAATTTCA GCTTAGTTAC
CAAAAAGATG ATGTTTATTT ATTTGAAAAA GATAGTAGGG CGAAGCGCAA GTCAAAAGTA
ATTTCTGAGG TCGGGGTTAG GGTGGGGTTT CCTACTCTCC CTTTTTCTTC ACAAATCATT
TAG
 
Protein sequence
MVIIKRLKSD FIFQITIIAA IILFICSTVR HLLFQSTAFE MGIYDQVTYL ISQGLPPISS 
FLEVHHLGNH AAWAMYPVAL FYKIYPSVYW LLLIQAICLA IGTLPTWSLA RYSGLNKKQA
FAIVMVYLLY PVVFNLNLFD FHPEVMALPA ILGAILAAKL DKTVWFCLAI IWVLGCKDAL
SLPVAAMGFW LYFYEKKRVC GAIALFAGVT WFIIATQILI PYFKDGQPPG GIGRYRYLGN
SIPEILLNLF LRPELVFGRL ISLKTLEYLF LLNLPIIWWL APKYLAPLIA ASPVLALNIL
SDIDAQRDLI HQYSLPILPF LLMAVIYTIA DGKCGLWYWL WNLRRSQKKE AKNISTIVSQ
LLPKFIIIWS CIGFLALAKY GYFWSIYLDY LDTWQATRTA VNIIQTKGSV LTTSEITPHL
SHRQFIKLII EEEELPRDEA LAEYDYVLIN VRHPGWKSSQ EYARKLVDKL KVNSEFQLSY
QKDDVYLFEK DSRAKRKSKV ISEVGVRVGF PTLPFSSQII