Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0414 |
Symbol | |
ID | 4241978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 648930 |
End bp | 650492 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105736 |
Product | hypothetical protein |
Protein accession | YP_720350 |
Protein GI | 113474289 |
COG category | [S] Function unknown |
COG ID | [COG3463] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.103112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAATTA TTAAACGATT AAAATCTGAT TTTATATTTC AAATAACTAT TATTGCTGCC ATAATTTTAT TTATCTGTAG CACAGTGCGT CACTTATTAT TTCAATCTAC TGCTTTTGAA ATGGGAATTT ATGACCAAGT TACTTATTTA ATAAGTCAAG GTTTACCTCC AATTTCTTCC TTTTTAGAAG TACATCATTT GGGAAATCAT GCTGCTTGGG CAATGTATCC AGTGGCATTA TTTTATAAAA TTTATCCTTC AGTTTATTGG CTATTACTAA TACAAGCAAT TTGTTTAGCA ATAGGAACCT TACCTACTTG GAGTTTAGCC CGTTATTCAG GGTTAAATAA AAAACAAGCT TTTGCCATAG TAATGGTTTA TTTATTATAC CCAGTAGTGT TTAATCTCAA CTTATTTGAT TTTCATCCAG AGGTAATGGC ATTGCCAGCA ATATTAGGAG CAATTTTAGC AGCAAAATTA GATAAAACCG TATGGTTTTG TTTAGCTATT ATCTGGGTTT TAGGCTGTAA AGATGCCTTA TCTTTACCTG TAGCTGCTAT GGGTTTTTGG TTATATTTCT ATGAAAAAAA GCGAGTATGT GGTGCCATAG CTTTGTTTGC TGGTGTGACT TGGTTTATTA TCGCTACTCA AATACTAATA CCTTATTTTA AGGATGGTCA ACCGCCAGGA GGAATAGGAC GTTATCGATA TTTAGGTAAC TCCATACCAG AAATTTTATT GAATCTTTTT TTAAGACCTG AACTGGTGTT TGGTAGATTA ATTTCTCTTA AAACTTTAGA ATATTTATTT TTGCTAAATC TACCGATAAT TTGGTGGCTT GCTCCTAAAT ATTTAGCTCC TTTAATAGCT GCTTCTCCAG TTTTGGCACT AAATATTCTC TCCGATATTG ATGCTCAACG AGATTTAATT CATCAGTATT CTTTGCCAAT ATTGCCTTTT TTATTAATGG CTGTAATTTA TACTATTGCT GATGGTAAAT GTGGTTTATG GTATTGGCTA TGGAATTTAC GCCGATCCCA AAAAAAAGAA GCTAAAAATA TATCTACAAT TGTTAGTCAA CTATTACCAA AATTTATCAT AATTTGGTCT TGTATCGGAT TTTTAGCTTT AGCTAAATAT GGTTATTTTT GGTCTATTTA CTTAGATTAT TTAGATACTT GGCAAGCTAC ACGAACTGCG GTGAATATAA TTCAGACAAA AGGTAGTGTT TTAACTACTT CAGAAATTAC TCCTCATTTA AGTCATCGTC AGTTTATTAA GTTAATTATT GAAGAAGAAG AATTACCTAG AGATGAAGCC TTAGCTGAGT ATGACTATGT ATTAATAAAT GTACGTCATC CTGGTTGGAA AAGTAGTCAA GAATATGCGC GAAAATTAGT AGATAAACTC AAGGTTAATT CAGAATTTCA GCTTAGTTAC CAAAAAGATG ATGTTTATTT ATTTGAAAAA GATAGTAGGG CGAAGCGCAA GTCAAAAGTA ATTTCTGAGG TCGGGGTTAG GGTGGGGTTT CCTACTCTCC CTTTTTCTTC ACAAATCATT TAG
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Protein sequence | MVIIKRLKSD FIFQITIIAA IILFICSTVR HLLFQSTAFE MGIYDQVTYL ISQGLPPISS FLEVHHLGNH AAWAMYPVAL FYKIYPSVYW LLLIQAICLA IGTLPTWSLA RYSGLNKKQA FAIVMVYLLY PVVFNLNLFD FHPEVMALPA ILGAILAAKL DKTVWFCLAI IWVLGCKDAL SLPVAAMGFW LYFYEKKRVC GAIALFAGVT WFIIATQILI PYFKDGQPPG GIGRYRYLGN SIPEILLNLF LRPELVFGRL ISLKTLEYLF LLNLPIIWWL APKYLAPLIA ASPVLALNIL SDIDAQRDLI HQYSLPILPF LLMAVIYTIA DGKCGLWYWL WNLRRSQKKE AKNISTIVSQ LLPKFIIIWS CIGFLALAKY GYFWSIYLDY LDTWQATRTA VNIIQTKGSV LTTSEITPHL SHRQFIKLII EEEELPRDEA LAEYDYVLIN VRHPGWKSSQ EYARKLVDKL KVNSEFQLSY QKDDVYLFEK DSRAKRKSKV ISEVGVRVGF PTLPFSSQII
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