Gene Tery_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0382 
Symbol 
ID4241616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp592556 
End bp594907 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content34% 
IMG OID638105709 
Productputative Chase2 sensor protein 
Protein accessionYP_720323 
Protein GI113474262 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA AAAGGGGGGT ATTTGAAGTT ATCAAGAATG AAAATCTTGA TAAAAAAATA 
CAGGGAATAT GTCATCAACA AGTTATGGAA CGAAGACGTG CTTTATTAAT TGGAATAACA
ATATTTGGTG AAGGATTAGA TAACTTCTCC CCAACACTAG AAGACGTTCA AGTTATGAAA
AAATGCTTGG AAGAAAAGGG TGGGTTTGAA GTTATCCAGG AGGAAAATCT TGATAGAAAA
GACATGGAAT ATGCCATCAA CAAGTTTTTT TACGAGTCTC AAAAATCAGA TACTTTACTT
ATTTATGTTT CAAGTCACGG TATTACAGAT GCAGAAGGAA CTTTTTATAT CGCAACTTCT
GAGACAAGTT ATGATAGGGA TACAGAAATA ATTACAGGAG CTATTGAAGC AAGTTATTTC
CACCGACAAA TAAAAAATTG TACTTCTAAT TCTCAAGTAT GGCTGTTAGA TTTATGTTAT
TCAGGCGCTT TTGTTCGAGG ATACAGTAAA GGTAAAAATG ATTCAGCAGA GAATTTACTA
ATTCAACAGT TGTTAAATCA AAAACAAAGA TATCAAGCCA TATCTAAGGG AATAAGTTCG
GATAATTCAG TTGAAATTAA ACAAAAAGAA GGATTAGTAA TTATTACTTC TTCAGCAGGG
GATCAAAAAT CATATTTTAT GGAAAATCAG TCTGATCTTT CTATCTTTAC TTACTATGCT
CAATTAGCTT TAAATGGTGA TGCTGCTAAC GAAGAAGGAA AAGTAACAGT TGACTCTTTT
TATAAGTTTT TGGAAGTTAA TATACCGAAA TATGTTAAAG AGAATATCCC CAAATTCAAA
TATGGCGGTG GTATGAAACC AGAAATCCAC ATTTTACATG GAGAAGCTTA TGATATTGTT
TTAGCAAAAA CTCAACTAGA GCCAAAGTTA CAGTTTAGGA GAAATGAATC TAAAGAGAAT
TTATTTAAGT GTAAATATCA AATAGAAAAA CCAAAAAATA AATTAGGAAT TGCCCAAGAA
GAGCCTGAAA TAATCTTTAA AGAATTACCA AACATTAACC TGAAAAGAGA GATAAATCAA
GGCAAATATC AACAAAATTT TTTTAAAATA TTAAAATCAT ATACTATTCT GTCTATTGTA
CTGCTAATAA GCATATTCAT AACTACTTTA GTAACAAAGC CTCCAGAGAG AGTACAACAA
TTCAAACTAC AGGCTTTCGA TCAGATGATA AGATGGAGGA GAGATGAAGG TCCAGATAAA
CGCTTGCTAA TTGTTACAGT TACTCCAGAA GATATTAAAT ATCAAAAGGA AATGGGGTGG
GAAATAGGAG GAGAATCACT ATCAGACCAA GCAATTATTA AAGTTTTAGA CAAATTAAAT
ACCTATAAAC CTCTAGTTAT CGGTCTAGAT ATCTTTCGAG ATTTTCCTGC TAAAGATGAA
CATTTAAAAA CTCAGCTCGC CCAGAATAAA AGCTTGATCG CTGTATGTAA AATTAAGGAA
GAAAAAAATA ATAGTATTGG CATAGAACCT CCTCCTGAAA TTCAAGAAAA ACAACGAATA
GGTTTTGCTG ATTTTCCTCA AGACTCTGGT GGCGTTATTC GACGTCAGTT GTTGGGGATG
TCAATTCCTG AAAACTCCCT TTGTTCAAGT TATTCTTTTA GTCTGAGGAT AGCAATTCGT
TATCTAAAAG AAAAAGGCAT GGAAAAGAGA GCAGGAGAAT TTAATCAAGG TAACTTAAAA
ATTAATGAGG TCCTTTTCCA TAAATTAGAG AAGGATGCTG GGGGATATCA TTTGCCTAAA
AGGGAAGCAC TAGGTTATCA AATTCTTCTC AATTACCGTT CTTCTGAGAA AATTGCGGAA
ACGATGACTC TTAAGGAATT ACTTGATGGA TCCCGTGACT CTAAACTCGC CCATCTGGTC
AAGAACAAAA TTGTTCTCAT TGGGACTGAT GCTGCTGAGG TTGGTTATGA AGATATGCAT
TTGACTCCCT ATAATAAGAA GATACCAGGA ATAATGATTC ATGGTCACAT GATCAGTCAG
ATTCTCAGTG CTGTCTTAGA TGGGCGAACA CTTTTGTGGT GGTGGCCGCA GGCCTTAGAA
AATATTTGGG TTTGGGGTTG GTCTTTTATA GGAGGAATAC TGGGTATTTG TTGGAGCAGG
CAAGTTTTTG GAAGGTGGTT CATTGGGATA ACTGTAGTAG CAGTACCTGT TACGTTATGG
GGAATCTGCT TTTTAGTTTT TATAGAAATT GGCGGATGGC TGCCACTGGT TCCCTCGATA
CTAGGTTTCT TTTTAACTGG GATAGCGATA ATTTTCTCTA ATAAAACAAT TAATGACACC
ATGTTTCTGT AA
 
Protein sequence
MLKKRGVFEV IKNENLDKKI QGICHQQVME RRRALLIGIT IFGEGLDNFS PTLEDVQVMK 
KCLEEKGGFE VIQEENLDRK DMEYAINKFF YESQKSDTLL IYVSSHGITD AEGTFYIATS
ETSYDRDTEI ITGAIEASYF HRQIKNCTSN SQVWLLDLCY SGAFVRGYSK GKNDSAENLL
IQQLLNQKQR YQAISKGISS DNSVEIKQKE GLVIITSSAG DQKSYFMENQ SDLSIFTYYA
QLALNGDAAN EEGKVTVDSF YKFLEVNIPK YVKENIPKFK YGGGMKPEIH ILHGEAYDIV
LAKTQLEPKL QFRRNESKEN LFKCKYQIEK PKNKLGIAQE EPEIIFKELP NINLKREINQ
GKYQQNFFKI LKSYTILSIV LLISIFITTL VTKPPERVQQ FKLQAFDQMI RWRRDEGPDK
RLLIVTVTPE DIKYQKEMGW EIGGESLSDQ AIIKVLDKLN TYKPLVIGLD IFRDFPAKDE
HLKTQLAQNK SLIAVCKIKE EKNNSIGIEP PPEIQEKQRI GFADFPQDSG GVIRRQLLGM
SIPENSLCSS YSFSLRIAIR YLKEKGMEKR AGEFNQGNLK INEVLFHKLE KDAGGYHLPK
REALGYQILL NYRSSEKIAE TMTLKELLDG SRDSKLAHLV KNKIVLIGTD AAEVGYEDMH
LTPYNKKIPG IMIHGHMISQ ILSAVLDGRT LLWWWPQALE NIWVWGWSFI GGILGICWSR
QVFGRWFIGI TVVAVPVTLW GICFLVFIEI GGWLPLVPSI LGFFLTGIAI IFSNKTINDT
MFL