| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1716 |
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| Symbol | dsdC |
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| ID | 4241248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1948118 |
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| End bp | 1949056 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638105307 |
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| Product | DNA-binding transcriptional regulator DsdC |
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| Protein accession | YP_719921 |
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| Protein GI | 113461852 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAATA TAGAACAAAA ATTACGGAAA AATACATCAA TTGATCGTCA TCAGTTGGCT
AAATTACATA CCTTTGAAGT GTGTGCAAGA TACCTTTCTT TTTCTATGGC AGCAGAGGAA
TTATGTATTA CTGCAAGTGC AGTGAGTCAC CAAATTACAA AATTGGAGTC CGACTTAGGA
TTTCAGCTTT TTAAACGATC TCACCGTAGA ATTATACTTA CTGAAGAAGG AATTCAGCTA
TTTCACACCT TGCAACATTC GCTTAAGTTA TTAAATAAAG AAATTTTTGA AATACGTAAT
CAAGAAATCA GTGGCACATT GACAATTTAT GCTCGCCCTT CCTTAGCTCA AAGTTGGCTT
ATTCCTGCTA TAGCAGGATT TAATCAAAAA TATCCGTTTA TCACACTGAA TATTTTGACT
GGCAATGAAG TTATTGATTT CAATAGGTAT AAAGTAGATT TAGCTATCTA TTATGATGAT
TTATATAGTG AAAATTTACA TCACTATGAA CTCATGCCAG AAAGCGTTAT TCCGGTTTGC
AGCCCTGAAT ATGCCGAGAA ACATAAACTT TATGGGAATC CGAAATCTTT AGAACACTGT
CTATTGCTTC ATGACGGACA AGCGTGGCAT TACAATTCCG ATTTTGAAGA ATGGGAGAGT
TGGTTAACAT ATTTCAATTA CAGTCTTAAT TTAAACCAAA TACAGTCCAT GGTATTCGAC
TGTTCGAATT TAGCATTAAC AGCTGCAATT AACCATATTG GCATCGCAAT GGGGAGAAAA
CAGTTAATCA CACCTTATTT AGTTAATGAC CAATTAATAA CCCCTTTCAA AGGCTTAGAA
AAACCGTGTA ATCAGCGTTA TTATATTGTA ACACCTTACA AACACAATCA AAACATTCAT
ACAGTAATTC ATTGGCTAAA GAAACATATG ACTTTTTAA
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| Protein sequence | MYNIEQKLRK NTSIDRHQLA KLHTFEVCAR YLSFSMAAEE LCITASAVSH QITKLESDLG
FQLFKRSHRR IILTEEGIQL FHTLQHSLKL LNKEIFEIRN QEISGTLTIY ARPSLAQSWL
IPAIAGFNQK YPFITLNILT GNEVIDFNRY KVDLAIYYDD LYSENLHHYE LMPESVIPVC
SPEYAEKHKL YGNPKSLEHC LLLHDGQAWH YNSDFEEWES WLTYFNYSLN LNQIQSMVFD
CSNLALTAAI NHIGIAMGRK QLITPYLVND QLITPFKGLE KPCNQRYYIV TPYKHNQNIH
TVIHWLKKHM TF
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