Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1330 |
Symbol | uidA |
ID | 4240842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1522017 |
End bp | 1523807 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104904 |
Product | beta-D-glucuronidase |
Protein accession | YP_719542 |
Protein GI | 113461473 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.237196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATATC CAACGTTAAC AAAAACAAGA AGTTTATATG ACCTTAGTGG TTTATGGCAA TTTAAACTAG GAGAGCATAA TCCCGAAAAG GATTTATCAC CAGAAGAAGT AATGGTAGTA CCAACTTCCT TTAATGACGT GGTGGTTGAC AAAGATAAGC GTAATTATAT TGGAGATTTT TGGTATGAGC GTTGGGTGGA TATTCCCAAA TTAGCGGAAA ATGATGAGTT AGTTTTACGC TTTGGTTCGG TAACTCACAA TGCCAAAATT TATGTTAACG GTCGAGAACT TGCTTCTCAT AAAGGTGGAT TCACTCCGTT TGAGGTAATT ATTCCAGAGG ATCTTTACCA AGAAAATCAA ATAAAAATCT CTGTCTGTGC CAATAATATC TTAGATTACA CCACACTTCC TGTTGGTAAT TACATTGAAG AGACTCAAGA AGATGGCAGT ATTAAAAAAG TGGTTAAAGA AAACTTTGAC TTCTTCAACT ATGCAGGAAT TCATCGCCCA GTAAAATTAA TGGTACGTCC TAAAATTCAC ATTTCAGATG TTACCATCGT CAGTGAGCTT TCAGATGACT TAAAGACGGC AAAACTTTCT ATTGCTGTTG AAACATCAAA GGCAGTTGAC ACAATCCAAG TAACTATTCT TGATGAAGAT CGTCAAGTAG TTGCACAATC AAGTAACGGG CATATCACTC TCGAACAAGT ACGCTTATGG GAAGTTTTAG ATGCTTATCT TTATACCGCA CATATTGAGC TACTTGTTGA TGGTAAAGTT GTTGATACCT ATGATGAGCC ATTTGGTGTA CGTAGTGTTC ATGTGGCAGA TGGTCAATTC TTTGTCAATC AAAAACCTGT TTATTTTAAA GGTTTTGGAA AACATGAAGA TACCTTTATC AATGGTCGAG GTTTAAACGA AGCAGCAAAC TTGATGGATA TGAACCTTTT GAAAGAAATT GGTGCCAACT CTTTCCGAAC CTCACACTAT CCTTATTCTG AAGAAATGAT GCGTCTTGCA GATCGCATGG GAGTTTTGGT AATTGATGAA ATTCCAGCCG TTGGACTTTT CCAAAACTTT ACCGCTTCTC TTGATTTAAA TCCCAAAGAT AATGGAACTT GGTCTGCTAT GAAAACCCGA GAAGCACATG AACAAGCGAT TCAAGAATTG GTAAAACGTG ATAAAAATCA CCCTTCAGTT GTCATGTGGG TAGTAGCAAA TGAACCAGCC AGCCATGAAG CAGGTGCTCA TGATTATTTC AAACCATTAG TTGCTCTTTA TAAGGAATTG GATCCGCAAA AACGTCCTGT TACCTTAGTC AATATTTTAC TGGCAACGCC AGAGCGTGAT GAAGTAATGG ATTTGGTAGA TGTCATTTCT TTGAATCGAT ACTATGCTTG GTATGTAGAT CATGGTGATT TAGCTAAAGG AGAAGCTGGA CTTCGTCAAG AGTTGTTAAA ATGGCAAAGT AAATTCCCAG ATAAACCAAT TCTTATGACA GAATATGGTG CAGATACTTT ACCTGGCTTA CATTCTATGT GGGATATTCC TTATACCGAA GAGTTTCAAT GTGATTTTTA TGCTATGAGC CATAGTGTTT TTGACAGCAT CCCTAATCTT GTTGGGGAAC AAGTATGGAA TTTTGCAGAC TTTGAAACAA ACCTTATGAT TTACCGTATA CAAGGAAACC ATAAAGGGCT TTTCTCACGC AATCGTCAAC CAAAACAAGT CGTTAAAGAA TTCAAAAAAC GCTGGACCGC TATTCCAAAC TACAATTACA AGAAAAAGTA A
|
Protein sequence | MLYPTLTKTR SLYDLSGLWQ FKLGEHNPEK DLSPEEVMVV PTSFNDVVVD KDKRNYIGDF WYERWVDIPK LAENDELVLR FGSVTHNAKI YVNGRELASH KGGFTPFEVI IPEDLYQENQ IKISVCANNI LDYTTLPVGN YIEETQEDGS IKKVVKENFD FFNYAGIHRP VKLMVRPKIH ISDVTIVSEL SDDLKTAKLS IAVETSKAVD TIQVTILDED RQVVAQSSNG HITLEQVRLW EVLDAYLYTA HIELLVDGKV VDTYDEPFGV RSVHVADGQF FVNQKPVYFK GFGKHEDTFI NGRGLNEAAN LMDMNLLKEI GANSFRTSHY PYSEEMMRLA DRMGVLVIDE IPAVGLFQNF TASLDLNPKD NGTWSAMKTR EAHEQAIQEL VKRDKNHPSV VMWVVANEPA SHEAGAHDYF KPLVALYKEL DPQKRPVTLV NILLATPERD EVMDLVDVIS LNRYYAWYVD HGDLAKGEAG LRQELLKWQS KFPDKPILMT EYGADTLPGL HSMWDIPYTE EFQCDFYAMS HSVFDSIPNL VGEQVWNFAD FETNLMIYRI QGNHKGLFSR NRQPKQVVKE FKKRWTAIPN YNYKKK
|
| |