Gene HS_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1275 
Symbol 
ID4240786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1462480 
End bp1464066 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content35% 
IMG OID638104848 
ProductFAD flavoprotein oxidase 
Protein accessionYP_719487 
Protein GI113461418 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA TTAAATTTCA CCACCAAATT GAAACGGAAT TATTGATTGT TGGAGCTGGT 
ATTGCAGGGT TAGCATGCTG TGTTGAGGCA AAAGCAAAAG GACTTAATCC GATTTTAATT
AGCAAATCAA TAATAGGTGG AGGTGCAAGT TTTTTTCCGC TAAAAGCGAC ACTTGGTATT
CAAATAACAG GGGATTCCGA TGACAAAATT CTCTTTCAAC AAGAAATTGA GAGAGTCGCT
TGTGGAGTAA ATAATCCTAA GATTGTTAGG GCTTATGTGG AAGAATCACC ACAAGCTATT
GAGCTATTGA GTAAAATTGG ATTTACTCCT TGGCTACGAC AAGATAACCG CCCTGCTTGC
TTTGCATACT ATACTCGCCC GATCTATTTA ATTAATAACT GGAAACAAAG TGCTAAACGG
GCTAAACAAA TTTTAATTCA GCACCAAATA GAATTTTATG AAAACTCTGT TTTATTACAT
ATTGTTACTG AACAAAATCA AATTAAAGGT GCTATTTTTG CTCAACAAAA GGGCGGTGAG
ATTCGCTATA TTTTTTGCTA CACGAATAAT ATCATATTAG CCACAGGCGG TATTGCGGGG
CTGTATCAAG ACAATCTCTA TCCTGCAGAT ATAATAGGTT CGACCCACTA TGTAGCTTAT
CAAGCAGGTG CAAAATTAAC CAATCTTGAA TTTATTCAAT TCATTCCTGC TTTTGTTAAA
CCTAAGTATA AAGTATTGTT CGGTGAGCAT ACTTTAAAAT ATCTGATAAA GGTTACTGAT
AGCAAAGGTA AGAATTTATT TTCTCATTTA TCACCGCAAC AATTTCAGCA AATGATACAA
CAACGTAGTA GCTATGCACC TTTTAGTGTG GATTTTCAAA GTGTTGAATT TGATCTCGTA
ATAATGAAAC ATTTGATTGA AAATCCTACT GAGAAAGGAG TGTATCTACA TTATTCTCCC
GAACTTTACC ATGATAAAAC GGAATTTTAT CAAGTCTATT TAACTTGGCT GGAAAAAGAA
ATGGATATTC ATTTATTGCG AGATCAGGTA ATAATTCGAC CTTTTGCTCA TAGTTGCAAC
GGTGGAATTG AAATCAATGA ATACGCCCAA ACAGCAGTAC AGGGGTTATT TGCGGTTGGG
GAAGTTTCTG CATGTATTGA AGGAGCAAAT CGTCTAGGAG GGAACTCTGT AGGCGGTAGC
CTCGTGTTTG CCAAAAGAGC GATACAAAAA GTTGTGGAAA ATGTACCGCA CTTTTCTACA
CAAAATAAAG AACATTATGT GTTAAAGGGA ATACGCTATT TACAACATTT AGCCAATCAA
GAGAAAAAAT CCGCTCACTC ATCAAGTGAA ATATTGCGAC AAGTAAGATC ATTAATGAAT
CAATTTGCCA ATGTGTATAG AACTGAAAAA AATTTGCAAT GTTTAATTAC ACAACTACAA
CATTTGGAAA AAAATTGTCC TATTGATCTC AAAAAGATTC ACAGTATTGA AATTTATCAT
GCTATTAAAA CTGCACAATT AGTAGTTCAT GCAATGATTA ATCGTAAACA ATCTTTGGGT
TCACATCAAA TTAGTTTGAA AGAATAA
 
Protein sequence
MTNIKFHHQI ETELLIVGAG IAGLACCVEA KAKGLNPILI SKSIIGGGAS FFPLKATLGI 
QITGDSDDKI LFQQEIERVA CGVNNPKIVR AYVEESPQAI ELLSKIGFTP WLRQDNRPAC
FAYYTRPIYL INNWKQSAKR AKQILIQHQI EFYENSVLLH IVTEQNQIKG AIFAQQKGGE
IRYIFCYTNN IILATGGIAG LYQDNLYPAD IIGSTHYVAY QAGAKLTNLE FIQFIPAFVK
PKYKVLFGEH TLKYLIKVTD SKGKNLFSHL SPQQFQQMIQ QRSSYAPFSV DFQSVEFDLV
IMKHLIENPT EKGVYLHYSP ELYHDKTEFY QVYLTWLEKE MDIHLLRDQV IIRPFAHSCN
GGIEINEYAQ TAVQGLFAVG EVSACIEGAN RLGGNSVGGS LVFAKRAIQK VVENVPHFST
QNKEHYVLKG IRYLQHLANQ EKKSAHSSSE ILRQVRSLMN QFANVYRTEK NLQCLITQLQ
HLEKNCPIDL KKIHSIEIYH AIKTAQLVVH AMINRKQSLG SHQISLKE