| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1274 |
|---|
| Symbol | |
|---|
| ID | 4240785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1461605 |
|---|
| End bp | 1462399 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638104847 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_719486 |
|---|
| Protein GI | 113461417 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAAAAA AACAACCAAT CATTGAATTA CAAGATATTG TGGTGCAATT TCCTTCCCGT
GATGGTTCAA TATTTAATCC GAAAAAATTT ACTGCTATAG ATGGTATTAG CCTAAATATT
CAGGCCGGAG AAACTTTGGG TTTAGTGGGA CAATCAGGTT GCGGTAAATC AACGCTTGCC
AATGTTATGA TTGGTTTACA AAAACCCTCT TCCGGCACAG TAAAATTTAA CGGTTTAAAG
ATGAAATACG GAAGTGCAGA GGCTCGCAAA CAATTCGGAC GACAAGTTTC AGTGATTTTT
CAAGATCCTG CCACCGCACT TAATCCAAGA ATGCGAGTAA TAGATATATT AAAAGATCCA
ATGAATATCC ATAATGTACT GCACCCCCAT GAACGTGAAA AACGGGTGTA TGAACTTCTT
TTCCGAGTGG GATTACCTCG CTCTGCAGCA TTGGTTGAAC CTACACGACT GTCGGGTGGA
CAAAAACAAC GAGTTGCTAT TGCTCGTGCA TTGGCATTAA ACCCAAAGTT AATCGTAGCG
GATGAACCTA CTTCTGCCCT TGATGTGTCT GTACGGGCTC AAGTGTTAAA TTTACTTGCC
GATCTTAAAA AAGAGTTAAA TCTCGCAATG GTGTTTATCT CTCATGATTT ACAAACTGTT
CGTCAAGTAT CTGATCGTAT TGTGGTGATG AATGGAGGCT TGATTGTAGA ACAAGGTGAT
GCAATGGACG TTTTTAATAA TCCGCAACAG GAATATACCA AAATTTTACT CAATGCAGCA
CCATCATTAT TGTAG
|
|---|
| Protein sequence | MLKKQPIIEL QDIVVQFPSR DGSIFNPKKF TAIDGISLNI QAGETLGLVG QSGCGKSTLA
NVMIGLQKPS SGTVKFNGLK MKYGSAEARK QFGRQVSVIF QDPATALNPR MRVIDILKDP
MNIHNVLHPH EREKRVYELL FRVGLPRSAA LVEPTRLSGG QKQRVAIARA LALNPKLIVA
DEPTSALDVS VRAQVLNLLA DLKKELNLAM VFISHDLQTV RQVSDRIVVM NGGLIVEQGD
AMDVFNNPQQ EYTKILLNAA PSLL
|
|---|
| |