Gene HS_1077 details

Gene Information

• Locus tag: HS_1077
• Symbol: sanA
• ID: 4240576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1194241
• End bp: 1194936
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 638104638
• Product: SanA protein
• Protein accession: YP_719289
• Protein GI: 113461220
• COG category: [S] Function unknown
• COG ID: [COG2949] Uncharacterized membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000060635
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAG ATTTCACACA ACTTTCTTTT CCACAATGGA TAATAACACT CGTCAAGCGA 
TTACTACATT ACGGCTTTGC TTTCAGCATT TTTACATTTT TTTCCCTTAT TATCATTGAT 
CGCAGCATAG CTTGGTATGT TCAGGACAGA ATTTATACAA AAATTGAAGA ACTTCCCTAC 
CGCCCTTATG GTATTGTGCT AGGCACAGCG AAATACTTTA GTAAAAATAA TCCCAATCTT 
TATTACAACA ATCGCCTGAC TGCTACTGTT GAGCTTTTTA AACAAGAGAA AATTGATTAT 
TTATTATTGA GTGGTGATAA CAGAACAATG CAATACAATG AACCCATAAC CATGTTTAAA 
GATTTGCGAA AAATGGATAT TCCGGAAGAT GTTATGTATA TGGATTTTGC CGGTTTTAGA 
ACGTTAGATT CCGTCATTCG TGCAGATAAA GTCTTTAAAG CACAGCCCAT GACAATTATT 
ACCCAACAAT TTCACTGCGA ACGGGCCTTA TTTATCGCAA AATTCTACGA TATTGATGCT 
ATCTGCTTTG CGGCAAAATC ACCTGCCAAC TACTTATCTG TACGAATGAG AGAATTATTT 
GCAAGAGTAA AAGCGATTTT AGATATTGTA TTAGAAAAAG AGCCTTATTT TTTGGGAAAT 
CCAGAACCAC TTCCAACACC AATAACTCAA TCATAA 

 

Protein sequence

MNLDFTQLSF PQWIITLVKR LLHYGFAFSI FTFFSLIIID RSIAWYVQDR IYTKIEELPY 
RPYGIVLGTA KYFSKNNPNL YYNNRLTATV ELFKQEKIDY LLLSGDNRTM QYNEPITMFK 
DLRKMDIPED VMYMDFAGFR TLDSVIRADK VFKAQPMTII TQQFHCERAL FIAKFYDIDA 
ICFAAKSPAN YLSVRMRELF ARVKAILDIV LEKEPYFLGN PEPLPTPITQ S