| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0922 |
|---|
| Symbol | |
|---|
| ID | 4240415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1015812 |
|---|
| End bp | 1016567 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638104478 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_719133 |
|---|
| Protein GI | 113461065 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.519346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAA ATCGTCTAGA ACAGATTTTA CTATTTCTAA AAAGTCATAA TATTGCTACC
GTAGAACAGC TGGTAAAGGT TACTGATGCT TCTCCTGCAA CTATCCGCCG TGATTTAATA
AAATTAGATG AAGAAGGTGT TGTAATTCGT ACACACGGAG GAGTAAGTTT AAACCACTTT
ATTCCATTCC AACCAACTAC AAATGAAAAG CAACTTAAGC AAATTACTGA AAAAGAGCGG
ATAGCCGAAT ATGCTGTTTC TCTCATTTCT CCGGGAGACT CTATTGTATT AGATGCAGGC
ACTACAACTT TGTGCATTGC AAAAAAAATC GCTCATATGC CACTTCGAGT GATTACGACT
GATCTGCATA TCGCTTTGTT ACTTTCCGAA TATAAACAAA TAGAATTGAC CATAACAGGG
GGAAGAGTGG ATAATAGTAG CCAATCCTGT ATCGGTAACC ATAGCCTGAC TTTATTGAAT
AACATTAATC CTGATATTGC TTTTGTAAGT TGTAATTCTT GGAGTTTGGA AAAAGGTGTT
ACCGCACCTA CAGAAGAGAA AGCTCATTTA AAAAGAATGC TCCAACAAAA TGCCAAACAA
AAAGTATTAG TTGCCGATAG CAGTAAATAT GGAAAATATT CCCTATTTTG TGCGACTCAA
CTTAATAACT TTACACAAAT TATCACAGAT AAAGGACTGT CTACTGAATA TTGTCAATTA
CTATCAAGTG ATATCTTTAA ACTGTCATTA GTATGA
|
|---|
| Protein sequence | MSKNRLEQIL LFLKSHNIAT VEQLVKVTDA SPATIRRDLI KLDEEGVVIR THGGVSLNHF
IPFQPTTNEK QLKQITEKER IAEYAVSLIS PGDSIVLDAG TTTLCIAKKI AHMPLRVITT
DLHIALLLSE YKQIELTITG GRVDNSSQSC IGNHSLTLLN NINPDIAFVS CNSWSLEKGV
TAPTEEKAHL KRMLQQNAKQ KVLVADSSKY GKYSLFCATQ LNNFTQIITD KGLSTEYCQL
LSSDIFKLSL V
|
|---|
| |