Gene HS_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0781 
SymbolfbpC 
ID4240272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp835204 
End bp836253 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content35% 
IMG OID638104335 
Productiron(III) ABC transporter, ATP-binding protein 
Protein accessionYP_718991 
Protein GI113460924 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00618653 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGTC TTAAAATTCA ATCACTTAGT TGTCAATACA AACAACAAAT TGTCTTACAT 
CAACTCGATC TAGAATTGAA AAAAAATGAA ATTTTATGTT TATTAGGAGC AAGTGGTTGC
GGAAAAACGA CACTATTAAA AGCCATCGCC GGATTACAGC CTATTACACA AGGAAAAATC
TACTTAAATG GACAAGATTT AACACCTGTC CCTGTAGAAC AACGCAACAT AGGTTTTATT
TTTCAGGATT ATGCTCTTTT TCCTCATTTA ACAGTCAAAG AAAATATTCA GTTTGGTTTG
GATAAAAAAA GTGCGATGGA AAAAAAGCAA ATTTCGCAAA ATATGCTTAA CTTAGTTCAT
CTAGATGGAC TGGAAGATCG TTACCCTCAC CAACTGTCAG GAGGTCAACA ACAGCGTGTC
GCTATTGCTC GAGCCTTAGC ATGCAAGCCA AAACTACTAT TGCTTGATGA GCCTTTTTCA
AATATTGATA GCCAAGTTCG CTATCAAATG ATTGATGAGA TTAAACAAAT AGTGAAACAA
CAAAGCATTT CAGCAATCTT TGTGACTCAC AGCAAAGAAG AAGCATTTGC TTTTGCCGAT
AATATTGCAT TGATGAAAGA TGGAAAAATT ATTCAAGTCG GAGCAACAGA TCAACTCTAT
TACCAACCTA ACAGTAAATT TGTGGCTGAA TTTTTAGGGA AATATAACTA TATTGATTGC
TATATTGATC AACAAAATCA ATTACATTCA ATCTTTGGTA TACAGCCTAT CGACAACTTA
CTCACACTTG CTGATCAATC TCCACTATTA CAAAATACGG AGTTACATTG GCTGGTTCGC
CCACATCAAA TTCAGGTCAT ACCAACTTTA CAGGGACATG GCACAATAAC TCAAAGTCAA
TTTTTAGGGC AATATTATCA GTACCAAGTT ACTCTATCTG ATGTACAACA AATCACCATT
CAAACAATGC AATCCTTAGA AATTGGACAA AAAGTACAAT TGTTCTATCA AGATCCTAAG
CCAATTCTCT TTCCCAAAAC AAATGTGTAA
 
Protein sequence
MNSLKIQSLS CQYKQQIVLH QLDLELKKNE ILCLLGASGC GKTTLLKAIA GLQPITQGKI 
YLNGQDLTPV PVEQRNIGFI FQDYALFPHL TVKENIQFGL DKKSAMEKKQ ISQNMLNLVH
LDGLEDRYPH QLSGGQQQRV AIARALACKP KLLLLDEPFS NIDSQVRYQM IDEIKQIVKQ
QSISAIFVTH SKEEAFAFAD NIALMKDGKI IQVGATDQLY YQPNSKFVAE FLGKYNYIDC
YIDQQNQLHS IFGIQPIDNL LTLADQSPLL QNTELHWLVR PHQIQVIPTL QGHGTITQSQ
FLGQYYQYQV TLSDVQQITI QTMQSLEIGQ KVQLFYQDPK PILFPKTNV