| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0686 |
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| Symbol | aphA |
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| ID | 4240174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 731160 |
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| End bp | 731858 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638104238 |
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| Product | aphA-like regulator |
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| Protein accession | YP_718898 |
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| Protein GI | 113460831 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000629381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGCTTAA TAAAAGAAAA AATACTAAAA ATTGGAATGT TGCTCGGCAT TATTTTGCTT
TGTCTAACTA TTATGTCTTT GATTTTATTT GGGATTAATA AGTTTAAATT AGGGTCACAA
TTAGCAACAA TTAATCAAAT GAACTACTTA TCCAATTTAT TAGTGCGTCA GCAAGCTAAT
CTTTTTGCTA TGCTTTTTGC GGATAACCCC AATTCGGACC TTTTGACCAA AAAACTGAAC
GACTTTACGA AAGAAGAATT TGTGATTGAT GCTTCTGTTT ATGGTGCTAA CGGTAAATTG
TTAGCACATA GTGCGAATTT TGTCGGTTTG CGTGATAAAT TGAACTTAAA TCAAAAAGCG
AACAATACTA CGCAACCGAA TATTCAGCAA ATTGTTGAAC CAATTTATTC ATCTAATGGT
ATTGAGGGTT TTTTACGTAT TACTCTTGAT ATGAAATATA GACAAGCAAG TCAGCGTAAA
ATAAACCACA TTTTTAATCA GTTATATGGT GAATTAATCA TTCTATTTTT AGCTAGTGCT
TTATTGGTGA ATTCCATTCA TTATTTTTTG AATTACCATC GTCGCACAAG ACAAAAAACG
CCTGATATGA TGCCTATTAC TCATGCAATA AAAAAAAGTA CCGCATCGGC GAATTTTCAT
CGCCGCCGTA AACGTTTTAA GCGTTCATTA TCCGGTTAA
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| Protein sequence | MSLIKEKILK IGMLLGIILL CLTIMSLILF GINKFKLGSQ LATINQMNYL SNLLVRQQAN
LFAMLFADNP NSDLLTKKLN DFTKEEFVID ASVYGANGKL LAHSANFVGL RDKLNLNQKA
NNTTQPNIQQ IVEPIYSSNG IEGFLRITLD MKYRQASQRK INHIFNQLYG ELIILFLASA
LLVNSIHYFL NYHRRTRQKT PDMMPITHAI KKSTASANFH RRRKRFKRSL SG
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