Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0629 |
Symbol | |
ID | 4240116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 674853 |
End bp | 675530 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638104181 |
Product | hypothetical protein |
Protein accession | YP_718841 |
Protein GI | 113460774 |
COG category | [R] General function prediction only |
COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAGGAA AGTATTCTAA AACGATAGAG AAAGCAAAAA TGACTAGACG ACTTCTTACT TATATTTGTA TCGACACTTC TGGTTCTATG CGTGGAGAGC CGATTGAAGC TGTCAATGTG GGGCTTCAAG CATTACTTTC TTCATTGCGT CAAAATCCCT ATGCCTTAGA AAGCATACAT CTTTCAATCA CTACTTTTGA TAACCAAGTG CAAAAAATTT TGCCTTTGAC ACCGCTTGAA CAAGTACAAA TGCCAACCGT TACTTGCCCT GATAGTGGAG CCACTTTTAT GGGGACAGCA TTGGAGCAAA TTGCAATTGA TGCGAAAAAT GATCGCATTG AAAATTCGGC AACCAAAAAA GGCGACTGGC GACCTATTTT GATTTTGCTC ACAGATGGCA AACCAAGTGA TATATTGGCA TTCAATAATG CCATACCTCA AATTAAAGCC TTGAACTTTG GGCGGATTGT TGCTTGTGCA GCAGGCCCTA AAGCCGATCC TGACTATTTG AAAAAACTGA CAGATGACGT GGTTTCGCTC GATACAATGG ACGCAAGTAG TTTCTCGCAA TTTTTCCAAT GGGTAACCCA AACTTTAAAT CAATCCAGCC AATCTGTCGG CAGTCCAAAT AGCGAACAAC TACCACCGCC ACCAGCGACA ATTAACGTAG TTTTATAG
|
Protein sequence | MLGKYSKTIE KAKMTRRLLT YICIDTSGSM RGEPIEAVNV GLQALLSSLR QNPYALESIH LSITTFDNQV QKILPLTPLE QVQMPTVTCP DSGATFMGTA LEQIAIDAKN DRIENSATKK GDWRPILILL TDGKPSDILA FNNAIPQIKA LNFGRIVACA AGPKADPDYL KKLTDDVVSL DTMDASSFSQ FFQWVTQTLN QSSQSVGSPN SEQLPPPPAT INVVL
|
| |