Gene HS_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0629 
Symbol 
ID4240116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp674853 
End bp675530 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content41% 
IMG OID638104181 
Producthypothetical protein 
Protein accessionYP_718841 
Protein GI113460774 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGGAA AGTATTCTAA AACGATAGAG AAAGCAAAAA TGACTAGACG ACTTCTTACT 
TATATTTGTA TCGACACTTC TGGTTCTATG CGTGGAGAGC CGATTGAAGC TGTCAATGTG
GGGCTTCAAG CATTACTTTC TTCATTGCGT CAAAATCCCT ATGCCTTAGA AAGCATACAT
CTTTCAATCA CTACTTTTGA TAACCAAGTG CAAAAAATTT TGCCTTTGAC ACCGCTTGAA
CAAGTACAAA TGCCAACCGT TACTTGCCCT GATAGTGGAG CCACTTTTAT GGGGACAGCA
TTGGAGCAAA TTGCAATTGA TGCGAAAAAT GATCGCATTG AAAATTCGGC AACCAAAAAA
GGCGACTGGC GACCTATTTT GATTTTGCTC ACAGATGGCA AACCAAGTGA TATATTGGCA
TTCAATAATG CCATACCTCA AATTAAAGCC TTGAACTTTG GGCGGATTGT TGCTTGTGCA
GCAGGCCCTA AAGCCGATCC TGACTATTTG AAAAAACTGA CAGATGACGT GGTTTCGCTC
GATACAATGG ACGCAAGTAG TTTCTCGCAA TTTTTCCAAT GGGTAACCCA AACTTTAAAT
CAATCCAGCC AATCTGTCGG CAGTCCAAAT AGCGAACAAC TACCACCGCC ACCAGCGACA
ATTAACGTAG TTTTATAG
 
Protein sequence
MLGKYSKTIE KAKMTRRLLT YICIDTSGSM RGEPIEAVNV GLQALLSSLR QNPYALESIH 
LSITTFDNQV QKILPLTPLE QVQMPTVTCP DSGATFMGTA LEQIAIDAKN DRIENSATKK
GDWRPILILL TDGKPSDILA FNNAIPQIKA LNFGRIVACA AGPKADPDYL KKLTDDVVSL
DTMDASSFSQ FFQWVTQTLN QSSQSVGSPN SEQLPPPPAT INVVL