Gene HS_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0601 
Symbol 
ID4240085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp643495 
End bp644784 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content40% 
IMG OID638104151 
Productxanthine/uracil family permease 
Protein accessionYP_718813 
Protein GI113460746 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.474213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGAAAC GTGGTTCTAA CGTACGTCAA GAAATTATTG CCGGATTAAC AACCTTCTTG 
GCTATGGTTT ATTCAGTAAT TGTTGTACCG AATATGCTGA GTGCAGCGGG ATTTCCAGCA
GAAAGTGTGT TTATAGCAAC TTGTTTGGTA GCAGGATTAG GTTCAATTTT AATTGGCTTA
TGGGCAAATG CACCGATGGC GATTGGTTGT GCTATTTCAT TAACCGCCTT TACTGCATTT
AGCTTAGTGT TGGGACAAGG TGTGAGCATT CCTGTCGCAT TAGGTGCGGT ATTTCTTATG
GGGATAGTCT TTACTTTAAT TTCTGCAACA GGTATTCGCT CTTGGATTTT ACGTAATCTT
CCGTCGAGTA TTGCACATGG TGCAGGTATT GGTATCGGTT TATTTTTGCT ACTTATCGCT
ACAACGAATG TGGGTATTAT TGTAGCCAAT CAAAATGGCT TATTAGTTAA GTTTGGTGAT
TTTACGTCTT TCTCTGTGCT GATGTCTTTG GTTGGACTTG CTGTAATTAT TGGCTTGGAA
AAAATGCAAG TCAAAGGTGG GATCTTATGG GTTATGATCG CAATTACGAT CGCAGGGCTT
ATTTGGGATC AAAATGTACA GTTTAAAGGC GAAATTTTCA GATTACCGAC TTTTGGTGAA
CAATCCTTAT TTTTGGAATT GGATATTATG GGAGCATTAC AACCGGCAAT TTTACCTGTT
GTTTTTGCCT TAGTAATGAC CGCAGTATTT GATGCAACAG GGACAATTCG TGCAGTTGCA
GGTCAAGCAA ATTTATTAGA CAAAGATGGT CAAATTATCA ATGGCGGTAA AGCATTAACA
GCGGATTCCG TAAGTAGCTT ATTATCTGGG GCACTTGGTA CCGCACCTGC CGCTGTATAT
ATTGAATCTG CCGCCGGAAC TGCTGCTGGG GGTAAAACAG GTATGACAGC GATTGTTGTC
GGTATACTGT TTTTATTAAT GCTATTTTTC CAGCCATTAG CAAGTTTGGT GCCAAACTAT
GCAACTGCAC CTGCGTTAAT GTACGTAGGA TTATTAATGT TAAGCAATGT CAGCAAACTT
GATTTTAGCG ATTTTGTTGG AGCAATGAGC GGACTGGTTT GTGGCGTATT TATTGTACTA
ACTGCAAATA TTGTAACCGG AATTATGCTA GGTTTTGCAA CTTTAGTTAT CGGTCGTTTA
GTTTGTGGTG ATTGGAAAAA ACTTAATGTA GGTACAGTCA TCATTGCCAT TGTTTTGGTT
GCTTTTTATA TTGGCGGTTG GGCAATTTAA
 
Protein sequence
MTKRGSNVRQ EIIAGLTTFL AMVYSVIVVP NMLSAAGFPA ESVFIATCLV AGLGSILIGL 
WANAPMAIGC AISLTAFTAF SLVLGQGVSI PVALGAVFLM GIVFTLISAT GIRSWILRNL
PSSIAHGAGI GIGLFLLLIA TTNVGIIVAN QNGLLVKFGD FTSFSVLMSL VGLAVIIGLE
KMQVKGGILW VMIAITIAGL IWDQNVQFKG EIFRLPTFGE QSLFLELDIM GALQPAILPV
VFALVMTAVF DATGTIRAVA GQANLLDKDG QIINGGKALT ADSVSSLLSG ALGTAPAAVY
IESAAGTAAG GKTGMTAIVV GILFLLMLFF QPLASLVPNY ATAPALMYVG LLMLSNVSKL
DFSDFVGAMS GLVCGVFIVL TANIVTGIML GFATLVIGRL VCGDWKKLNV GTVIIAIVLV
AFYIGGWAI