| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0592 |
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| Symbol | sapC |
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| ID | 4240076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 631107 |
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| End bp | 631994 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104142 |
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| Product | peptide ABC transporter, permease |
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| Protein accession | YP_718804 |
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| Protein GI | 113460737 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.462704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAGATA AAGAACCTGA AGAATTTCGC GAAACACAAG GATTAAAACA TATTTGGAAA
TTTTTCTACC AAGATAAATT GGCATTAACT GGCTTTTATC TTTTTTTATT GCTCATTATT
ACCGCACTTT TCAGTCAATT TATCGCACCT TATAGTGATA CAGCACAGTT TGTCGGCTTC
GAGTTACTAC CCCCCTCTTG GGCTAATAGC GGAAAAATAG CTTATTTTTT CGGTACTGAT
GATATTGGAC GAGATATTTT TAGCCGATTG ATTCGAGGTA CAACTTACAC TTTTGGTGCC
GCCCTCATTG TTGTATTATT CACATCTATT TTGGGTGGAA TTCTTGGTAT TTGGGCAGGA
TTATCACAAG GGTTAAAAGC AAGAGTCTTA GGACATTTTT TTGATATTTT CTTATCAATC
CCTATTTTAC TCATCGCTAT TATTATCGCT ACATTAATGC AACCAAGTTT AATCAATGCA
ATGCTTGCCA TCACGCTTGC ATTACTTCCC TATTTTATTC ATGAAATTTA CCAAGCCGTA
CAACAAGAAC TGAAAAAAGA ATACATTTTG ATGCTACGAC TTGATGGTGC AAGTAATTGG
CAACTTGTGA AAGAAACCAT TTTACCTAAT ATTATTATTC GTTATATTCA TGAAACCAGC
AGAGCATTTA TCATTGCCAT TATTGATATT AGTGCATTAA GTTTTATTTC GCTGGGTGCA
CAACGACCAA CGCCAGAATG GGGAACAATG ATAAAAGATT ATATAGAATT AATTTATCTT
GCCCCTTGGG CAACAATCTT ACCCGGTGTT GCTATTATCA TCACCATTGT TATCGTTCTC
ATTTTGACTA ATGGGCTTTG TAAAGCCATA GAAAAATATT ATGGATAA
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| Protein sequence | MLDKEPEEFR ETQGLKHIWK FFYQDKLALT GFYLFLLLII TALFSQFIAP YSDTAQFVGF
ELLPPSWANS GKIAYFFGTD DIGRDIFSRL IRGTTYTFGA ALIVVLFTSI LGGILGIWAG
LSQGLKARVL GHFFDIFLSI PILLIAIIIA TLMQPSLINA MLAITLALLP YFIHEIYQAV
QQELKKEYIL MLRLDGASNW QLVKETILPN IIIRYIHETS RAFIIAIIDI SALSFISLGA
QRPTPEWGTM IKDYIELIYL APWATILPGV AIIITIVIVL ILTNGLCKAI EKYYG
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