Gene HS_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0583 
Symbol 
ID4240067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp619605 
End bp620651 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content40% 
IMG OID638104133 
Producttransposase 
Protein accessionYP_718795 
Protein GI113460728 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAATC GAGCGTTAGC TTGGCAGAAC GAGCAATATG AACAAGACAA TAATCAAAAA 
TTCAGCTATT CAAAATTAAC ATCTCTACTT CCGCAATGGA AAAAAGAGCT AATTTGGCTC
AAAGAATGCC ATTCTCAAGT GTTGCAACAG TCGTTAAAAG ATCTTGAAAG TGCGTTCAAA
AATTTCTTTC AGCAGCGTGC AGACTTCCCA AAATTCAAGA AAAAAGGCAT AAAAGAGAGC
TTTCGTTTTC CGCAAGGCTG CAAAATTCAG CCACAAAACG ACCGCTTGTA TCTGCCGAAA
ATCGGTTGGG TTCGCTATCG TAATAGTCGT GAAATTGTGG GCGAAGTGAA AAATGTTACC
GTCAGCCAAA AGTGCGGTCG CTTTTTTGTG AGCATTCAAA CGGAATTTGA ACACGAAATC
CCGATGCATA AAGGCGGAGA AATCGGCATT GATATGGGCA TTGCACGCTT TGCAACCCTT
TCCAATGGCG AATTTTTTGA GCCGATAAAT GCGTTTAAAA CCTACAAAGG TAAGTTAGCC
AAACTGCAAA AACAGCTTAA AAATAAAGTG AAGTTCAGTA AAAACTGGCA AAAACTGAAA
GAAAAAATCG GCAAATTACA CCATAAAATA GCTAACTGCC GAAAAGATTT TTTGCACAAA
ATCTCAACCC AAATCAGCAA AAACCACGCA ATGATCTACG TTGAAGATTT GCAAGTTGCG
AATATGTCCA AATCGGCAAA AGGCACAGTG GAAGCACACG GAAAAAATGT GAAACAGAAA
TCAGGCTTAA ACCGTTCAAT ACGGGATCAA TCTTGGTTTG AATTTAGACG ACAGCTAGAC
TATAAAACGC AATGGCTTGG CGGATTTTTA GTTGCTGTTC CAGCACAGAA TACTAGTCGA
ACTTGCCCTT GTTGTGGGCA TATTGCAAAA GAAAACCGTG AAACTCAAGC TCATTTTGAA
TGTGTAGAAT GTGGCTATAC AGAAAATGCC GATGTAGTGG GAGCAATGAA TGTTCTCACA
CGTGGGCAAG CAATAGTCCA AGCATAA
 
Protein sequence
MFNRALAWQN EQYEQDNNQK FSYSKLTSLL PQWKKELIWL KECHSQVLQQ SLKDLESAFK 
NFFQQRADFP KFKKKGIKES FRFPQGCKIQ PQNDRLYLPK IGWVRYRNSR EIVGEVKNVT
VSQKCGRFFV SIQTEFEHEI PMHKGGEIGI DMGIARFATL SNGEFFEPIN AFKTYKGKLA
KLQKQLKNKV KFSKNWQKLK EKIGKLHHKI ANCRKDFLHK ISTQISKNHA MIYVEDLQVA
NMSKSAKGTV EAHGKNVKQK SGLNRSIRDQ SWFEFRRQLD YKTQWLGGFL VAVPAQNTSR
TCPCCGHIAK ENRETQAHFE CVECGYTENA DVVGAMNVLT RGQAIVQA