| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0457 |
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| Symbol | pilC |
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| ID | 4239938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 488524 |
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| End bp | 489744 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638104004 |
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| Product | protein transport protein |
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| Protein accession | YP_718667 |
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| Protein GI | 113460602 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATT TGAAGCTATT TTCTTGGAAA GCCACTAATT TTTTACAGCA AAAACAAGCT
GGAATGCTTG TTATCGAAAA TGTACAAGAG GCCAAACGCT ATTTATTACA ACAAGGGCTA
AACAATATAT ATTTACAGCG TCATTGGCAA CTGAATAAAA AGCCTAAAAA AATAGAATTT
TGTGATCTAT TAACTCAACT AGCAATGTTA TTACAATCCT CAATTCCTTT AAAAGATAGC
TTACAAATTT TATTGAGAAA TTGTGTTAAT ATTTCTTTAA ATCAATGGGT TAGATATATT
TTAAAAAATC TTGAAGGAGG ATTATCTTTT TCACAATCTG TGGCTCAATC AGGTCTATAT
TTTTCTTATC AAGAACGCCA ACTCATTTCT GTTGGAGAAA TGACGGGAGA TTTAGCCTCT
GTTTGCCAAC AAATAGCAGA ACATCGTCAG CAGGCATTAG CATTACAACG CAAAATTCAA
AAAATTTTAC TCTATCCAAT GATAGTTTTA AGTATTTCTA TCATTCTCAC CGCACTTCTA
TTAATTTTTA TCGTGCCACA ATTTGCCGAA ATGTACGGTT CTAATCAATC CGAGCTTCCT
TTTTTTACGC AACTATTGTT AAACATATCC TCTTTTTTAC AACAGTATTT TTTTCATATG
ATAGCGGTAT CTATTTTATT TTTTTATCTA ATAAAATTAC GTTTACACAA TTCATATAGT
TTTCAACTCA AAAAAGATTG GTTTTTATCG CATGTGCCGT TGTTAAATAA AATTATTCGG
CTTAATAGAA CGATAAGTTT TTGCCGTAGT TTAGGATTAA TGCTCAACTC AGGCATTCCT
TTACAACAAA GTCTATATTC TTTCCTTCCC CAAAACTCTA TCAACATACA GAAAAAGATT
GAGGGAGATC TCACGTTAAT TAATGAAGTA AAGCTAACAT TACGTGGTAT CGAACAAGGA
TATAAATTCT CTCAGTCTGT AAGCAGTAAT TTGTTTTCTA TACAAACACA ACAAATGCTA
CAAGTTGGTG AAAAGAGTGG AAATCTAGGT TTAATTCTGC AACATATCGC AGAAAATCAG
CAACAACAGT TAGATCATCA AATTGATTTA CTTTCACAAA TGTTAGAACC GTTTATGATG
GTGATCATTG GCGGATTAAT AGGCTTGATT ATGTTAGGTA TGTATTTACC AATCTTTAAT
ATGGGAAGTT TAATTCAATG A
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| Protein sequence | MQNLKLFSWK ATNFLQQKQA GMLVIENVQE AKRYLLQQGL NNIYLQRHWQ LNKKPKKIEF
CDLLTQLAML LQSSIPLKDS LQILLRNCVN ISLNQWVRYI LKNLEGGLSF SQSVAQSGLY
FSYQERQLIS VGEMTGDLAS VCQQIAEHRQ QALALQRKIQ KILLYPMIVL SISIILTALL
LIFIVPQFAE MYGSNQSELP FFTQLLLNIS SFLQQYFFHM IAVSILFFYL IKLRLHNSYS
FQLKKDWFLS HVPLLNKIIR LNRTISFCRS LGLMLNSGIP LQQSLYSFLP QNSINIQKKI
EGDLTLINEV KLTLRGIEQG YKFSQSVSSN LFSIQTQQML QVGEKSGNLG LILQHIAENQ
QQQLDHQIDL LSQMLEPFMM VIIGGLIGLI MLGMYLPIFN MGSLIQ
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