Gene HS_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0438 
SymbolrusA 
ID4239914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp465880 
End bp466239 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content43% 
IMG OID638103980 
Productribosomal small subunit pseudouridine synthase A 
Protein accessionYP_718647 
Protein GI113460583 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATAG ATACGACCGG ATTGGTTTTA CTTACCGACG ACGGACAATG GTCACACCGC 
GTAACTTCGC CAAAACACCT CTGCGACAAA ACCTATCTCG TCACCCTTGC CGATCCGGTA
GAAGACTTCT ATCAAGCGGA AATCGAAAAA GGCATTTTAT TGCGCGGCGA AAAAACGCCA
ACTAAACCGG CAACGCTTGA AATCTTAGAT GACTACAATG TGAATTTAAC CATCAGCGAA
GGACGTTATC ATCAAGTCAA ACGAATGTTT GCTGCGCTGG GCAACAAAGT GGTCGATTTG
CACCGTTGGA AAATTGGTGT CATCATGCTG GATGACAATT TATATGAATT TTATTCATAA
 
Protein sequence
MDIDTTGLVL LTDDGQWSHR VTSPKHLCDK TYLVTLADPV EDFYQAEIEK GILLRGEKTP 
TKPATLEILD DYNVNLTISE GRYHQVKRMF AALGNKVVDL HRWKIGVIML DDNLYEFYS