Gene HS_0319 details

Gene Information

• Locus tag: HS_0319
• Symbol: rlpA
• ID: 4239792
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 317042
• End bp: 317602
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 638103859
• Product: rare lipoprotein A
• Protein accession: YP_718527
• Protein GI: 113460465
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000762425
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTCAA ACAAAATATT TAAATTATGC ACCGCACTTT TTATGGCATT AGTTTCGCTG 
TCAATACAGG CGGATACGAA AAAATTATAT GGCATTGAAG GAGCTAAGCT AGTCTATCAA 
AAACTGAGTA AAAAGCCCTA TACTTACGTA GTCAAAGGCG TTAGATATAC AACACTACCC 
TACGAAAAGG CAAAAAATTA TTCACAAAAA GGAATGGCAA GTTTTTATCA CAAAAAATTT 
CATGGACGTA AAACTGCAAA CGGTGAAATT TTTAATAATA ATGCCTATAC AGCAGCACAT 
AAAACTTTGC CACTAAACTC TTATGTGGTC GTAACTAATT TACGCAATAA TCGTAAAGTG 
ATCGTAAGAA TCAATGACCG AGGGCCTTTT AGCAAAGCAC GAATTATTGA TTTATCTGAA 
GCTGCCGCAA AAGAGCTTGG AATGATTCCT GCCGGCATAG CAAAAGTAAA GGTAGAATCA 
TTATATGTTG ATGCTTATGG AAAAATTTCC GGACCGGGTA CAAAAACGTT GGCTAAAACA 
CGTAAAAACA TTAAATCTTA G 

 

Protein sequence

MKSNKIFKLC TALFMALVSL SIQADTKKLY GIEGAKLVYQ KLSKKPYTYV VKGVRYTTLP 
YEKAKNYSQK GMASFYHKKF HGRKTANGEI FNNNAYTAAH KTLPLNSYVV VTNLRNNRKV 
IVRINDRGPF SKARIIDLSE AAAKELGMIP AGIAKVKVES LYVDAYGKIS GPGTKTLAKT 
RKNIKS