Gene HS_0261 details

Gene Information

• Locus tag: HS_0261
• Symbol: tolA
• ID: 4239459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 258118
• End bp: 259173
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638103798
• Product: cell envelope integrity inner membrane protein TolA
• Protein accession: YP_718469
• Protein GI: 113460407
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3064] Membrane protein involved in colicin uptake
• TIGRFAM ID: [TIGR02794] TolA protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00647443
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTGTAATC ATCGACAAAA AAATGAGCTT GGTGCCATTC TGCTATCAAT TTTTCTGCAT 
ATTTTGTTAT TAAGTTTGCT GGTATTAGGA TCTAACTATA ATAATGTTGA AATCATGGGA 
GGTGGAGAAG GTGATGGTGA AGTAATGTCT GCTGTTATGG TTGATACGGG AACCATTGCA 
AAAGAGTGGG GACGTTTACA GGAAAAGAAA AAAAGCAATC CGGATAAACA AGAAACCTTT 
GTTGAAGCAA CGCAAGAAGA CGAGTTAATG GAGAATGTTG ATGTATTTGA AGAAAAAATA 
AGAGAAGATG AAGAGGTACA GAAAAGACTT GCAGAGCAAA AAATAAAAGA AGAAAAAATT 
CAGCAAGAGC GTTTAGCAAA GCAATTGGAA GAAGATAATG CCAAGAAAGA GGCTGTTGCA 
AAGTTGAAAG CAGAGGCTGA AGAAATGCGT TTACAGGCAT TGGCAAAAAA AATTGAAGAA 
GAGAAAAAGG TTAGAGACGC TGAGGAAAAA CAAAAAGCAG AGAAGTTAGC GAAAGAGAGA 
GCAGAGAAGT TAGCAAAAGA GAAAGCGGAT AGATTAGCCA AACAAAAGGC ACTTAAGGAA 
GCAAAAATAA AAGCGGAAAA AGCAGCTAAA GCAAAAGCGG AATTAGCTCA ACGCAAAGCA 
GAACAAGCGG CGTTAGATGA TTTTTTCAAT GGAGGTGATA TTGCAGGAAG TAGCAAAAAT 
GGTGGAAATA TGACGATGAA AGGTTCTCAA GGAGTGGGTG CTGGTTTTGA AAACGGCAAA 
GGCGGAAGAA CTGGAGAGCA ATATGCTGCT CAAATTAAGA GAGAAATTCA GCGTCGCTTT 
CTAAAAGAAC CTAGGTTTGC TAATAAAGTT TGTGTTATTG AGGTTGAATT AGCAAGAGAT 
GGAACGATCA CTAACTTTAG AAAATTATCT GGCTCAGATG ATATTTGTAC TGCGGGGTTA 
TCAGCGGTAT CTAGAACGAA AAAGGTACCG GAGGCACCAA CTGATGAGAT TTATAGAAAA 
TATAAGAAAT TCCCACTCGA ATTTAGATTG AAATAA 

 

Protein sequence

MCNHRQKNEL GAILLSIFLH ILLLSLLVLG SNYNNVEIMG GGEGDGEVMS AVMVDTGTIA 
KEWGRLQEKK KSNPDKQETF VEATQEDELM ENVDVFEEKI REDEEVQKRL AEQKIKEEKI 
QQERLAKQLE EDNAKKEAVA KLKAEAEEMR LQALAKKIEE EKKVRDAEEK QKAEKLAKER 
AEKLAKEKAD RLAKQKALKE AKIKAEKAAK AKAELAQRKA EQAALDDFFN GGDIAGSSKN 
GGNMTMKGSQ GVGAGFENGK GGRTGEQYAA QIKREIQRRF LKEPRFANKV CVIEVELARD 
GTITNFRKLS GSDDICTAGL SAVSRTKKVP EAPTDEIYRK YKKFPLEFRL K