Gene HS_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0239 
Symbol 
ID4239755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp240202 
End bp240933 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID638103776 
ProductTatD family deoxyribonuclease 
Protein accessionYP_718447 
Protein GI113460385 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCAAC TCGTACATAA TGCCCGCCAA GTTGATGTAG AGAAAATACT GATTGTGGCA 
GTATTGCAGC GAGATTTTGA AAATATTGTA AACATGACCG CACTTTACCC GACTCAGCTG
TATTATGGAT TAGGCTTACA TCCTTTATAT ATTGAACAGC ATAGTAAAAA TGATTTAGAT
ATTTTGTCTC AAGCGTTAGA ACAAGGTTCT GCTGCTTGTA GAGCAATTGC TGAAATAGGT
TTGGAACGAG GAAAATCGGA TCTGATTAGC GAGAGATTAT GGAAAAAGCA ATGTGAATTT
CTAGAAGTTC AACTCAGTTT TGCACAACGC TTTAATTTGC CTGTCAGCTT GCACAGTCGC
CAATCTCACG ACCACTTATT CACTTTTCTG AAACGAATAA AAGTAAATAA GTGCGGTGTA
ATTCATGGTT TTGCCGGAAG TTATGATCAA GCAAAGCGTT TTGTGGATTT AGGCTATAAA
ATCGGTGTTG GCGGCACAAT CACCTATGAA CGTGCCAATA AAACCAGAAA TACTATTGCA
AAATTACCTT TAGACAGTTT ATTACTGGAA ACGGATAGTC CCGATATGCC CATTTGTGGT
TTTCAAGGTC AACCCAATCG TTCAGAGCGA ATTATTCATG TTTTCCATGA ATTATGTCAA
TTAAGAAAAG AACCGGCAGA ACTTATCGCA TCTACAATCT GGAAAAATAG CTGTAACCTG
TTCGCAAAAT AA
 
Protein sequence
MAQLVHNARQ VDVEKILIVA VLQRDFENIV NMTALYPTQL YYGLGLHPLY IEQHSKNDLD 
ILSQALEQGS AACRAIAEIG LERGKSDLIS ERLWKKQCEF LEVQLSFAQR FNLPVSLHSR
QSHDHLFTFL KRIKVNKCGV IHGFAGSYDQ AKRFVDLGYK IGVGGTITYE RANKTRNTIA
KLPLDSLLLE TDSPDMPICG FQGQPNRSER IIHVFHELCQ LRKEPAELIA STIWKNSCNL
FAK