| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0176 |
|---|
| Symbol | gph |
|---|
| ID | 4239687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 156556 |
|---|
| End bp | 157230 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638103708 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_718383 |
|---|
| Protein GI | 113460322 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.790253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAT TTAAATTAAT TGGTTTTGAT TTAGATGGTA CCTTAGTAAA CAGTTTGCCT
GATTTAGCTT TATCAATTAA CTCTGCTTTG AAAGACGTTA ATTTGCCACA AGCATCGGAA
AACTTGGTGA TGACTTGGAT TGGCAATGGT GCTGATGTTT TGAGTCAACG TGCAGTGGAT
TGGGCTTGTA AACAAGCTGA AAAAGAGTTA ACGGAAGATG AGTTTAAATA TTTTAAACGT
CAATTTGGCT TTTATTATGG CGAAAATCTT TGTAATATCA GTCGATTATA TCCAAATGTG
AAAGAAACCT TAGAAGCATT AAAAGCACAA GGCTACATTT TAGCAGTCGT GACGAATAAA
CCAACTAAAC ATGTTCAGCC TATTTTAACT GCTTTTGGGA TCGATCATTT GTTTAGTGAA
ATGCTGGGGG GACAATCTTT ACCGGAAATT AAGCCTCATC CGGCACCTTT CTATTATTTA
TGTGGCAAGT TTGGTCTGTA TCCGAAACAA ATTCTTTTTG TTGGCGATTC GCAAAATGAT
ATTTTTGCTG CTCATTCTGC GGGTTGTGCT GTGGTTGGGT TAACTTATGG TTATAACTAT
AATATTCCAA TTGCACAATC AAAACCTGAT TGGATCTTTG ATGATTTTGC TGATATTTTA
AAAATTACAC AATAA
|
|---|
| Protein sequence | MTQFKLIGFD LDGTLVNSLP DLALSINSAL KDVNLPQASE NLVMTWIGNG ADVLSQRAVD
WACKQAEKEL TEDEFKYFKR QFGFYYGENL CNISRLYPNV KETLEALKAQ GYILAVVTNK
PTKHVQPILT AFGIDHLFSE MLGGQSLPEI KPHPAPFYYL CGKFGLYPKQ ILFVGDSQND
IFAAHSAGCA VVGLTYGYNY NIPIAQSKPD WIFDDFADIL KITQ
|
|---|
| |