Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0053 |
Symbol | |
ID | 4239561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 58786 |
End bp | 59769 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638103584 |
Product | ABC transporter, permease, sugar transport |
Protein accession | YP_718259 |
Protein GI | 113460202 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.201876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGA AATACAGCTG GGAAATAGCT CTCTTTTGTC TACTGATACT GGAAATTATC GGGTTCGGTT TGGTTAATCC TCGGTTATTG GATCTCAAAG TCTTATTTAA CAGCACCAGC GATTTTATTT ATATCGGAAT GTTGGCATTG CCTCTAACAC TGATTATAGT CAGTGGAGGG ATGGATATTT CATTTGGATC TGTAGTGGGA CTATGTGCCA TTACTCTCGG CGTATTATTT AGACTAGGAA TACCGTTAAG TGTAGCAATT GCGGTGACAT TTGCAGTCGG ATCATTGTGT GGTGCGATTA ATGCTGTACT CATTATCTAT ACTCAAGTTA ACCCGCTGGT TATTACGCTT GGCACAATGT ATCTGTTTGG TGGTGGTGCA TTGTTATTAT CAGGTTTTGC TGGTGCAACG GGCTATGAGG GTATTGGTGG ATTTCCCGAT GTGTTACTTG ATTTTGCAAA TCTCAGTTTT GGTATTATTC CAACACCGAT TATTTATTTC TTAATAATGA CATCACTGTT TTGGCTGTTG ATGCATCGTA CTCGTATTGG TCGTAGCACA TTTTTAATTG GGCAAAATTT ACGGGTCTCT AAGTATAGTG CTGTACCGGT TAATCAAACT CTATTTATTA TTTATCCGTT AATTGGTTTG ATTGCGGCTT TTGTCGGTGT GTTGCTGGTA TCCTACTTTG GTTCAGCTCG TTCGGACTTA GGGAGTTCGT TGTTAATGCC GGCACTAACC GCAGTTGTAC TTGGTGGTGC GAATATTTAC GGTGGTTCAG GTTCAGTGAT TGGTACAGCA ATAGCTGCAT TATTGATTGG CTACTTACAA CAAGGGTTGC AGATGGTTGG AATTTCGAAT GAAACATCCA GTGCCTTGTC CGGAGCATTG TTGATTATTG TACTTATCGG GAAATCGCTT AATACACATC GGGCAGTAGT GATTCAATGG TGGAATCGAA TCCGAGCAGT TTAA
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Protein sequence | MIKKYSWEIA LFCLLILEII GFGLVNPRLL DLKVLFNSTS DFIYIGMLAL PLTLIIVSGG MDISFGSVVG LCAITLGVLF RLGIPLSVAI AVTFAVGSLC GAINAVLIIY TQVNPLVITL GTMYLFGGGA LLLSGFAGAT GYEGIGGFPD VLLDFANLSF GIIPTPIIYF LIMTSLFWLL MHRTRIGRST FLIGQNLRVS KYSAVPVNQT LFIIYPLIGL IAAFVGVLLV SYFGSARSDL GSSLLMPALT AVVLGGANIY GGSGSVIGTA IAALLIGYLQ QGLQMVGISN ETSSALSGAL LIIVLIGKSL NTHRAVVIQW WNRIRAV
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