Gene HS_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0020 
SymboluxuR 
ID4239528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp21510 
End bp22280 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content35% 
IMG OID638103551 
ProductGntR family transcriptional regulator 
Protein accessionYP_718226 
Protein GI113460169 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.321852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAATAT CGCGAGGATT TATGCAAAAT AATTCTAGAA CTTACACAAA AATAGGAAAA 
ATACTTAAAG AGGAAATTTC TCAAGGAAAA TACAAAATAG GCGATAAGCT ACCTACCGAG
AGAAATATTT CTGAAAGATT TGAAGTAAGT AGAACTATCG TAAGGGAAGC GATAGTAATG
TTGGAAGTGG AAAAGATTAT TGAAGTAAGA AAAGGATCCG GAATATACGT CATAAAAATC
CCAGATCTTC TTCAAGAAGA AGCGGATAAT AAGCTAAGAG ATGTAGGCCC ATTTGAACTA
CTTCAAGCAC GACAGTTGTT AGAAAGCAGT ATTGCTGAAT TTGCTGCACA ACAGGTTACC
AAACAAGATA TTTTACGACT TAGGCAAATT CTTGATAAAG AAAAGGAATT ATTTGCTCAA
AATATTGATG ACTGCAGTGC TGACAAAGAA TTCCATCTTG CTCTTGCCGA AATTACTGGA
AACGATGTCC TTATTCAAAC TCAAGAGCAA CTTTGGAAAT ATCGTTTTAA TAATGCTATG
TGGACACAGC TTCATTCGCG TATCATACAT AATGATCTCC ATCACTTATG GATTAAAGAT
CATGAAACGA TTTTAAATGC GATTCAGCGC AAAAATCCTG CTTTGGCACG TAAAGCAATG
TGGCAACATC TAGAAAATGT TAAAACTAAA TTGCTTGAAC TATCCGATGT AGAGGACACT
AATTTTGATG GATATCTATT CAATGTAAAC CCCGTTATAG TAGGAATCTA A
 
Protein sequence
MPISRGFMQN NSRTYTKIGK ILKEEISQGK YKIGDKLPTE RNISERFEVS RTIVREAIVM 
LEVEKIIEVR KGSGIYVIKI PDLLQEEADN KLRDVGPFEL LQARQLLESS IAEFAAQQVT
KQDILRLRQI LDKEKELFAQ NIDDCSADKE FHLALAEITG NDVLIQTQEQ LWKYRFNNAM
WTQLHSRIIH NDLHHLWIKD HETILNAIQR KNPALARKAM WQHLENVKTK LLELSDVEDT
NFDGYLFNVN PVIVGI