Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0020 |
Symbol | uxuR |
ID | 4239528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 21510 |
End bp | 22280 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638103551 |
Product | GntR family transcriptional regulator |
Protein accession | YP_718226 |
Protein GI | 113460169 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.321852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAATAT CGCGAGGATT TATGCAAAAT AATTCTAGAA CTTACACAAA AATAGGAAAA ATACTTAAAG AGGAAATTTC TCAAGGAAAA TACAAAATAG GCGATAAGCT ACCTACCGAG AGAAATATTT CTGAAAGATT TGAAGTAAGT AGAACTATCG TAAGGGAAGC GATAGTAATG TTGGAAGTGG AAAAGATTAT TGAAGTAAGA AAAGGATCCG GAATATACGT CATAAAAATC CCAGATCTTC TTCAAGAAGA AGCGGATAAT AAGCTAAGAG ATGTAGGCCC ATTTGAACTA CTTCAAGCAC GACAGTTGTT AGAAAGCAGT ATTGCTGAAT TTGCTGCACA ACAGGTTACC AAACAAGATA TTTTACGACT TAGGCAAATT CTTGATAAAG AAAAGGAATT ATTTGCTCAA AATATTGATG ACTGCAGTGC TGACAAAGAA TTCCATCTTG CTCTTGCCGA AATTACTGGA AACGATGTCC TTATTCAAAC TCAAGAGCAA CTTTGGAAAT ATCGTTTTAA TAATGCTATG TGGACACAGC TTCATTCGCG TATCATACAT AATGATCTCC ATCACTTATG GATTAAAGAT CATGAAACGA TTTTAAATGC GATTCAGCGC AAAAATCCTG CTTTGGCACG TAAAGCAATG TGGCAACATC TAGAAAATGT TAAAACTAAA TTGCTTGAAC TATCCGATGT AGAGGACACT AATTTTGATG GATATCTATT CAATGTAAAC CCCGTTATAG TAGGAATCTA A
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Protein sequence | MPISRGFMQN NSRTYTKIGK ILKEEISQGK YKIGDKLPTE RNISERFEVS RTIVREAIVM LEVEKIIEVR KGSGIYVIKI PDLLQEEADN KLRDVGPFEL LQARQLLESS IAEFAAQQVT KQDILRLRQI LDKEKELFAQ NIDDCSADKE FHLALAEITG NDVLIQTQEQ LWKYRFNNAM WTQLHSRIIH NDLHHLWIKD HETILNAIQR KNPALARKAM WQHLENVKTK LLELSDVEDT NFDGYLFNVN PVIVGI
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