| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_A0006 |
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| Symbol | bcn |
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| ID | 4206633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008263 |
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| Strand | + |
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| Start bp | 4894 |
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| End bp | 8097 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642567228 |
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| Product | bacteriocin |
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| Protein accession | YP_699915 |
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| Protein GI | 110804003 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3103] SH3 domain protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 272 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTTAA AAATAAAAAG TGAGGTTTTA AAAATGATAA TGAGATTTAT ACCAAGTGTA
AATCCAGGAG ATTCAGTTGG AAGTAAGCCA ACGTTTCCTG TAAATGCACA AGTAAAAGGA
GATTTCTTAT ATTTAAGAGA TGCTAATGGA AATCAAATAG CAGGAAGAAG TGTAAGTGAT
GGAGATGAAA TAACTGTTTT AAAAGTAGAT CATACTAAAC AGTTAGCGTT AGTACAATAT
CCTGCAGGAA CTATTTATAG ACAAGGCTAT GTAACTAATG CAACAAGTAT TATAAAATAC
AAAAACGAAT ATAATTGGTT AAATGGTTCT ACTCCAGAAA CTGTATATGA TGTAGATAAG
AAAACACAAA TAGGTAGTTT AGATCCAAGA GAGAAAGCAA CAATACTTTA TAAAGTAGAT
GGAATGACTG CACTTGTATA TGATACAAGT AAAGGTAAAA TGACTAAATC AGGTTTAGTT
CACTATGCTG GTTCGGGTGG ATCTACTGGT GGCGGAGATA TAAATGGTAT AGCACCAGGA
GGGGAAGTAC CAGGAGGATT CACATATCCT AATAATGCTC AGGTTGTTGG AGATGACTTA
TATTTAAGAG ATGCTAATGG TAATCAAATA TCTGGAAGAG TTGTAAGTAA TGGTGATAAG
ATAACAGTTT TAGATGTAGG ATATACTAAG CAATTAGCTT TAGTACAATA TCCTGCTGGT
AGTGTTGTTA GGCAAGGATA TGTTACAAAT GCAACTAACT TGATTCGTTA CTTTAAACAA
GGAGAATGGT TAAACGGAAG TACTACAGAG CCTGTATTAG ATGAGAATGG TGGTTCATTA
GGATCATTAA GTCCATATGA AGCTGCAACA CCATTATATA AGAAAAATGG AATGACACAT
GTAGTATATG ATACTTCTAA AGGTCCAAAT ACAAAATCAG GTTATGTAAA ATTTGAGGGA
TTGCCAGAGT TGCCTGATAC AGGTATTCAA ATTCCTTCAA CTTCACATTC ACAAGCAACT
GTTGAAGTAT ATGGAACAAG TGGAAAAGGA AGACCGTTAA AAGTTTATAA AATAGGAAGT
GGTAGTAAAG TACTATTTGC AGGATTCGCG TTACATGGAT GGGAAGATAA CTGGTCAAAT
GATGGACTTG CATTAGTAAA TATAGCAAAT TCATTAATAG AAAAGATAGG AGATTATAAA
GCACAAAATG GTCTTCATGG ATGGACAGTA TATATAGCAC CTTGTATGAA CCCTGACGGA
GTTGTGGTTA AAGGAACTCA TAATGGGCCA GGTAGATGTG CGGTAACTAC TAGAGTTGAT
ATGAATAGAT GTTTCCCATA TAAATTTTCA CCACAATATA TTTCAAGAAA CTATACTGGA
CCTAATCCAT TAGGAGCACC AGAAGCTGTA GCACTTAAAA ATTTAGTTGA AAGAATAAAT
GTTAGTTCAA GTGAAATGGT AGTTTTAGAT TTCCATGGGT GGATGAATTT CACTCAAGGT
AATGCAGAGT TAGGAAGCTA TTTTGGAAAT CAATTTGGGT TTGGGCATAA AAACTTATAT
AGCTCAGGTT TCTTTTCAAG TTGGGCAACA ACTTTAAGGA ATACAAAAGC AGTTTTAATT
GAGTATCCTA CAAATACTTA TAGCTATAAT GATGTTATAA ATAAAAATTA TATAGGAAAA
ACTTTCAATG GAATAATAAA TATTCTTAAG AATAATCCTA ATGGTGGAGA TGTAGATAAT
GGTGGATCAG ATTCGAGTGA AATTCCTTAT AATGCAAATG GAGAAGTAAT TAACGTAGAA
CCAACATCAG CATTAAATGT AAGAAGTGGT CCAGGAACAA CATATAGAGC AATAGGAACA
CTAAAGTTAG GAAATAGAGT AACTATTTTA GCTAAAACTA AACCGGCTGG AGAAACGAAG
GATTGGTATA AAATAAGTTT TAATTATGGA AGTGGATATA TAAGAAGTGA TTTCGTTAAG
CTAGACTCAT CTGAGATTAA TTATAATGCT GTAGGTGAAA TAATAAATGT ATCATCTTTT
TTGAATGTAA GAAGTGGTCC AGGTACAAAT TTTGAGATGT TAGGTAAATT ATATAAGGGG
GATGTAGTTT TAATAGTATC AAAGAATGGA GACTGGTATA AGATTAGATA TGGTACTACA
TTTGGATATA TTCATAAAGA TTATGTATAT ATAAATAAGG AAAATGATAA TTTTGTTGAA
AAAAAGGTTC AGATTGGTGC AGTTGAAATT AATAAGGTTA AAACTATAGA TGGCATAGTT
TTCGCTAATA TAAATCAGAT GTTAAAAGGA TTTTGTAATA ATAATGGTTA TACCAAAGCA
CCATCAGGAG ATATTATAGT AACAGTTCAC AATTTTCATA AAAAGATGGA TGTTTCTAAA
ACATTACCTA TTTCTAAATG TAAGTTAATA AATGGTGATT ATTATTATAA TTTAAATGAA
TTCATAAGTA TTTTAGGCTA TGATGAATTT GTTCAAAATA TATCTGATTA TAGTGATGTT
ATATATAAAT ATGTGTATAT AGGAATGGAT GATGAGACAC AGTTTACAAT TCATGAAGCT
TTAGATGCAT TAGGGTTTAT ACCAGTTGTA GGTGATGTTA TTGATGGTGT TAATGCTATT
ATGTATGCTT TGGAAAAAGA TTATCTTAAT GCAGCACTTA GTTTAGGAGC TATAATTCCA
GTTATAGGTA GTCCATTCTT TAAAGGTGGT AAATATGGAT TTAAAATAAT GAGTGGATTC
TCAAAAGTTG CTAATAAATC CAAGAAATTT GTCAAAAAAC TTGATATTAC TGAAGGTAGG
TATGTGTATA GAGCTATACA TGATGCTGAT TTACAAAGAA TAAAAGATGG CTTAGGATTA
CAGGCAAAGA ATCCTAATGG AACTTGGAGT TTAGAAGAAC ACATAGTTAG GGGATCAAAT
TCAGAATCAT GGAAAAATGA TAGATTTATA TCAACATCGC TTGATTTAGA GATTTCAAGG
ATATTTAATT CTTCAAAAAA TTTAGGTATA ATAAAAATAG ATTTAGAAAA AGTTCCAAAG
GAATTAATAT ATAAATCATA TAAGGAATTC CCTTTATATG ATATTAATGG ACACAGATCT
TTAGCTTATG AATTTTCAGT TTGGCAACAA GAAATAAGTA TTCTTAAAGA AATTCCTAGG
GATGCATTTG AATTTATAGA ATAA
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| Protein sequence | MILKIKSEVL KMIMRFIPSV NPGDSVGSKP TFPVNAQVKG DFLYLRDANG NQIAGRSVSD
GDEITVLKVD HTKQLALVQY PAGTIYRQGY VTNATSIIKY KNEYNWLNGS TPETVYDVDK
KTQIGSLDPR EKATILYKVD GMTALVYDTS KGKMTKSGLV HYAGSGGSTG GGDINGIAPG
GEVPGGFTYP NNAQVVGDDL YLRDANGNQI SGRVVSNGDK ITVLDVGYTK QLALVQYPAG
SVVRQGYVTN ATNLIRYFKQ GEWLNGSTTE PVLDENGGSL GSLSPYEAAT PLYKKNGMTH
VVYDTSKGPN TKSGYVKFEG LPELPDTGIQ IPSTSHSQAT VEVYGTSGKG RPLKVYKIGS
GSKVLFAGFA LHGWEDNWSN DGLALVNIAN SLIEKIGDYK AQNGLHGWTV YIAPCMNPDG
VVVKGTHNGP GRCAVTTRVD MNRCFPYKFS PQYISRNYTG PNPLGAPEAV ALKNLVERIN
VSSSEMVVLD FHGWMNFTQG NAELGSYFGN QFGFGHKNLY SSGFFSSWAT TLRNTKAVLI
EYPTNTYSYN DVINKNYIGK TFNGIINILK NNPNGGDVDN GGSDSSEIPY NANGEVINVE
PTSALNVRSG PGTTYRAIGT LKLGNRVTIL AKTKPAGETK DWYKISFNYG SGYIRSDFVK
LDSSEINYNA VGEIINVSSF LNVRSGPGTN FEMLGKLYKG DVVLIVSKNG DWYKIRYGTT
FGYIHKDYVY INKENDNFVE KKVQIGAVEI NKVKTIDGIV FANINQMLKG FCNNNGYTKA
PSGDIIVTVH NFHKKMDVSK TLPISKCKLI NGDYYYNLNE FISILGYDEF VQNISDYSDV
IYKYVYIGMD DETQFTIHEA LDALGFIPVV GDVIDGVNAI MYALEKDYLN AALSLGAIIP
VIGSPFFKGG KYGFKIMSGF SKVANKSKKF VKKLDITEGR YVYRAIHDAD LQRIKDGLGL
QAKNPNGTWS LEEHIVRGSN SESWKNDRFI STSLDLEISR IFNSSKNLGI IKIDLEKVPK
ELIYKSYKEF PLYDINGHRS LAYEFSVWQQ EISILKEIPR DAFEFIE
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