Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2607 |
Symbol | |
ID | 4204999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2841969 |
End bp | 2844620 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642567157 |
Product | laminarinase |
Protein accession | YP_699854 |
Protein GI | 110803248 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAT TATTAGCTAA AATATTAGCA GCGATAGTTA TTACAACAAC AATAACTAAT ATAGGGGTTT CTAGTAATAT ATATGCAAAT ACAATGTATA GAAATAATCA AGAAAGTACC GATAAAAATG AGAAGTGGAA TTTAGTATGG GAAGATAATT TTAATGGTGA TTATTTAAAT TTACAAGATT GGAATTATGA AACCCATGAA CCAGGCTGGG TAAATAATGA ATTACAGGAG TATACGGATG ATATAAGAAA TATTTATGTT GATAACGGTA ATTTAGTTAT TAAGGCTATT AAAGAAGAAA CAGAGGATGG TATTAAATAT ACATCAGGTA AAGTGACAAC TCAAAATAAG CATGATTATA AATATGGACG CTTTGAAGCA AGATTAAAAG TACCAGAGGG TCAGGGTCTA TGGCCAGCAT TTTGGATGAT GCCAACAGAG GAAGAACTTT ATGGATCGTG GCCTAGATGT GGAGAAATAG ATATTATGGA AGTATTAGGA CACGAACCAA ATAAGGCATA TGGAACTATT CATTATGGAA ATCCACATCA AGAAAGCCAA GGTTCTTATA TATTAAATGG AGAAACCTTT GCAGATGATT ATCATGTTTT TGCTGTAGAA TGGGAACCAA GTGAAATGAG ATTTTATATA GATGGAAACC TATATCATAC TGTAAATAAC TGGTATACAA AACAAGAAGG AGGAGATGAA ATAACTTATC CAGCACCATT TGATCAACCA TTTTATCTTC AATTTAACTT AGCTGTTGGA GGAAATTGGC CAGGTAATCC TGATGAAACT ACTAATTTTG ATAATGCTGA ATATAAGATA GATTATGTAA GGGTATATCA ATTAGAAAAT TATAATGAAA ATGTACCTAA ACCAGAAAAA CCACCTGTTG ATTTAAGGGA ACCAGATACT ACTGGAAATT ATATAATTAA TAGCGATTTT TCAGAAGTTG AGGATTTAGA AGATAATGTT GATTGGTATA CATTAAAGAC ACTTGGAGGA GAAGGTAAGG GCAGAATTGA AGATAATAAA ATTATACTTA GTTCAGAAAG TTCAGGAAAA GAAAATTATT CTTTACAATT AGTACAAGCA GCAATACCTT TAAAGAAAAA TAATATTTAT AGATTATCAT TTGATGCAAG GGCTGCTGAA AACAGGGATA TGGTAATAAA TATTACATCT CCAGATAGAG GATATATACG TCAATTACAA GATACAACTG TTGATTTAAA AAATGAATTC CAAAAGTATT CTTATGAATT TACAATGAAG GATAATGATG ATGCAAATGC AAGAGTTGAA TTTAATTATG GAAATAGAAA TTCATTAGCA GATATTGAAA TAACTAATGT TAGATTAGAA AAAATAGGTG AATATGAAAA TGTAAATGAA GATAAAAAGA CGATTCTTCC AAATGGAAAT TATGTGTATA ATGGAACATT TGATGTGGGC GAAGATCGTA TGAAGTATTG GGAAGTAGAT TCTAAAATAG AAGATGTACA AGCTACTGTA ACTAATATAA ATAATAAAAG AGAATTTAAG ATAAGTATTC CTAAATCAAC TTCAAATTTA TCAGATGTTA TATTAAGAGA AAGTGAACTT GGAATAGCAG AAAATAAAGA ATATTATCTT TCTTTTGATG CTTATGCTGA GGAAGATAAA ACAATAAAAG CTCAAATAAA TAATAAAATC TTTGAAGCAG AATTAACTAC AGAAAAAAAG AACTTTAAGT ATAAATTTAA TACACAAGAT GTTTTAGAAA ATAGAAATTT AGAATTTTTA TTAGGTACAC CAGGGGTAAC TTATATTGAT AATGTTAAAA TTATGGATAC ATCATTAATA ATAAATGGAG ATTTCAGTAA TGAATTTTCT AAGTGGGAAG TTTTTAAAGA GAGTAGTATT TCTTCTGATG TATCAAGTAT CATAGATAAA TCTAATGGAA ATAATGCTGC ACAAATAAAT ATTTCAAATA CTGGAGATGC AGATTGGAAA ATTCAATTAA AGCAAAGTGG AGTAAAATTA GAAAAAGGTA AAAAATACAA ATTATCATTA GATGCAAAGA GTACAATTAA AAGAGCAATT ATGTTTACTA TTCAAAGGGA TGGAAGTAAT GATAATGATT GGAGACCTTA TGCTAATACT CAAATAGTAG ATTTAGAAAA TGAATATAAC AAATATGAAA TTATATTTGA TATGACAGAA GAAAGTGATT CAAATTCAAT ATTTTCTATA TCTATGGGGG CTGTAAATAA TACTCAAATT ACAGAAGAAC ATTCAATTTA TATAGATAAT GTAAATTTAA TAGAAGTTGT AAAGTCTGAA GATGATGATA ACACTAGTAA TCCAAATAAT CCTAATGATC CATCAATAAA AGATGACATT GATGATAATA ACAATAATAA TGGAAGCAAT GGTAATAACG GAAATAATAA TAGTAATAGT GCAAACAATA GTGGAAACAA TAACAATGCT AATAACAAAG TACCTTCACA AGATAAAAAT ACTAATTCAA CTTTGGTTGA AACTGGTAAA AAATCATATT TAGCATTATT TGGAGTAATA TTAGTATTAT TAGGAATTGG TATTACTGGA TTAAATAAAA AATATAAAAA AACAGACAAA TTAATTCATT AA
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Protein sequence | MKRLLAKILA AIVITTTITN IGVSSNIYAN TMYRNNQEST DKNEKWNLVW EDNFNGDYLN LQDWNYETHE PGWVNNELQE YTDDIRNIYV DNGNLVIKAI KEETEDGIKY TSGKVTTQNK HDYKYGRFEA RLKVPEGQGL WPAFWMMPTE EELYGSWPRC GEIDIMEVLG HEPNKAYGTI HYGNPHQESQ GSYILNGETF ADDYHVFAVE WEPSEMRFYI DGNLYHTVNN WYTKQEGGDE ITYPAPFDQP FYLQFNLAVG GNWPGNPDET TNFDNAEYKI DYVRVYQLEN YNENVPKPEK PPVDLREPDT TGNYIINSDF SEVEDLEDNV DWYTLKTLGG EGKGRIEDNK IILSSESSGK ENYSLQLVQA AIPLKKNNIY RLSFDARAAE NRDMVINITS PDRGYIRQLQ DTTVDLKNEF QKYSYEFTMK DNDDANARVE FNYGNRNSLA DIEITNVRLE KIGEYENVNE DKKTILPNGN YVYNGTFDVG EDRMKYWEVD SKIEDVQATV TNINNKREFK ISIPKSTSNL SDVILRESEL GIAENKEYYL SFDAYAEEDK TIKAQINNKI FEAELTTEKK NFKYKFNTQD VLENRNLEFL LGTPGVTYID NVKIMDTSLI INGDFSNEFS KWEVFKESSI SSDVSSIIDK SNGNNAAQIN ISNTGDADWK IQLKQSGVKL EKGKKYKLSL DAKSTIKRAI MFTIQRDGSN DNDWRPYANT QIVDLENEYN KYEIIFDMTE ESDSNSIFSI SMGAVNNTQI TEEHSIYIDN VNLIEVVKSE DDDNTSNPNN PNDPSIKDDI DDNNNNNGSN GNNGNNNSNS ANNSGNNNNA NNKVPSQDKN TNSTLVETGK KSYLALFGVI LVLLGIGITG LNKKYKKTDK LIH
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