| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2558 |
|---|
| Symbol | |
|---|
| ID | 4204079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2783513 |
|---|
| End bp | 2784943 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642567108 |
|---|
| Product | BFD/(2Fe-2S)-binding domain-containing protein |
|---|
| Protein accession | YP_699805 |
|---|
| Protein GI | 110801487 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATG ATGTAGCAAT TATAGGATCT GGAGTAATAG GTGGAGCAAT ATTTAGAGAA
TTAACAAAGT ATAATTTAAA GGTTGTAGAA TTAGAAAAAG AAAATGACGT TGCTATGGGA
GCATCTAAGG CAAATTCAGC AATTGTCCAT TCAGGATATG ATCCTGAACC TGGAACATTA
ATGGCAAAAT ACAATGTTGA AGGAAATAAG ATTTTTGATA AGCTTTGTAA AGACTTATCA
GTTCCTTTTA AGAGAAATGG ATCATTAATT ATAGGTTTTG ATGAAGATGA CCAAAAAGAA
TTAGAGGTTT TATATAATAG AGGAATTCAA AACGGAGTAG AAGGAGTAAA ACTTTTATCA
GCAGAAGAAG TTTTAGAAAT GGAACCAAAC TTAAATAAAG ATGTAAAGGG AGCTTTATTC
TGCCCAACAG GAGGAATTGT TGGAGCATAT GAATTTACTA TAGCTCTTTC AGAAAATGCT
ATAGACAATG GAGGAGAATT AAGATTAAAC TCTAAAGTTG TTGGTATTGA AAAAGATGAA
AACTTTAAAA TAAAACTTGA AAATGGGGAT GTAGTAGAAG CTAGATTTAT AGTAAACGCA
GCAGGTATTT ATGCTGATAA GATTCACAAT ATGGTTTGTG AGGAAGACTT TAAGATAACT
CCTAGAAAAG GTGAATACTA TGTTTTAGAT AAGAGTCAAG GAAGATTATT TGAAAAGACA
ATATTCCAAT GTCCAACTAA ACTTGGAAAA GGGGTTTTAG TTACTCCAAC AGTTCATGGA
AATTTATTAG TTGGTCCAGA TGCTATTGAT ACTTGTGATA AAGATTCAGT TTCTACAGAG
TATTATGGAT TAGCTAAGGT TAGAGAAGTT TCTTTAAAAA CAACTAACAA AGTTAATTTT
AGAGAAAATA TTAGAAACTT TGCAGGACTT CGTGCTATAG CTGATAAGCC TGACTTCATA
ATCGGAGAAG CTAAAGATGT AAAAGGATTC TTTGATGTAG CAGGAATAAA ATCACCAGGT
TTAAGTTCAG CACCAGCTAT TGCAGTGGAT GTAGTTAAAA TGCTTGGTGA AAGTGGACTA
GCTTTAGAGA AAAAAGATAA TTTCAATGAA AAAAGAGAAC AAGTACACTT TATAGAACTT
TCTCCAGAAG AAAAAGCAAA TTTAATTAAA AAAGATAGTA GATATGGAAG AATAATTTGT
AGATGTGAAA ATATAACTGA AGGAGAGATT GTTGATAGTA TAAATAGAAC TTTAGGAGCT
AGAACTATTG ATGGAGTTAA GAGAAGATGC CGTCCTGGTT GTGGAAGATG TCAAGGTGGT
TTCTGTGGAC CTAGAGTTCA AGAAATAATA TCTCGTGAAA CTGGTATGAA TATAGAAGAA
GTGCTTTTAG ATAAAAATGG TTCATATATA ATAAGTGGAA AAACAAAGTA G
|
|---|
| Protein sequence | MIYDVAIIGS GVIGGAIFRE LTKYNLKVVE LEKENDVAMG ASKANSAIVH SGYDPEPGTL
MAKYNVEGNK IFDKLCKDLS VPFKRNGSLI IGFDEDDQKE LEVLYNRGIQ NGVEGVKLLS
AEEVLEMEPN LNKDVKGALF CPTGGIVGAY EFTIALSENA IDNGGELRLN SKVVGIEKDE
NFKIKLENGD VVEARFIVNA AGIYADKIHN MVCEEDFKIT PRKGEYYVLD KSQGRLFEKT
IFQCPTKLGK GVLVTPTVHG NLLVGPDAID TCDKDSVSTE YYGLAKVREV SLKTTNKVNF
RENIRNFAGL RAIADKPDFI IGEAKDVKGF FDVAGIKSPG LSSAPAIAVD VVKMLGESGL
ALEKKDNFNE KREQVHFIEL SPEEKANLIK KDSRYGRIIC RCENITEGEI VDSINRTLGA
RTIDGVKRRC RPGCGRCQGG FCGPRVQEII SRETGMNIEE VLLDKNGSYI ISGKTK
|
|---|
| |