Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2359 |
Symbol | |
ID | 4203989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2592108 |
End bp | 2592806 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566909 |
Product | DNA-binding response regulator |
Protein accession | YP_699624 |
Protein GI | 110801717 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.596616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG AAAAGTTTAA TGTTTTAGTT GTAGATGATG AAAAAGAAAT AAGAGATGCA ATAGATATAT ATTTAAGAGG AGAGGGAATA AATGTAATAA AGTCTGGAGA TGGATTTGAG GCCTTAGAAA TTTTAGATAA GGAAGATATA CATCTAGTGG TCTTAGATAT AATGATGCCT AAGTTAGATG GAATGAGAAC TTGTTTAAAA ATAAGAGAAA GTAGAAATAT ACCAATAATA TTACTTTCAG CAAAATCAGA AGATAGTGAT AAGATATTAG GTTTAAACAT AGGAGCAGAT GATTACGTTA CGAAACCTTT TAATCACTTA GAACTTGTTG CAAGAGTAAA ATCTCAATTA AGAAGATATG ATTATCCTTT AAATAGGGAA AATACTCAAG ATTTAATAGT AATAAAAGAT TTAACTATAG ATACTGTAAA TAAGCAGGTT TCTTTAAGGG GAGAAAATAT AAAATTAACT GCAACAGAGT ATAAGATATT AACACTTTTA GCATCACATC CAGGAAGAAT ATTTTCAATT AAAGAAATCT ATGAAAGAGT TTGGGAAGAA CCTTTTTATA AAAGTGAAAA TACAGTAACA GTTCATATAA GAAGAATGAG AGAAAAGATA GAAATAAATT CAAAAGAACC TGAGTATATA AAGGTGGTGT GGGGACTTGG GTATAAAATT GACAAGTAG
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Protein sequence | MEKEKFNVLV VDDEKEIRDA IDIYLRGEGI NVIKSGDGFE ALEILDKEDI HLVVLDIMMP KLDGMRTCLK IRESRNIPII LLSAKSEDSD KILGLNIGAD DYVTKPFNHL ELVARVKSQL RRYDYPLNRE NTQDLIVIKD LTIDTVNKQV SLRGENIKLT ATEYKILTLL ASHPGRIFSI KEIYERVWEE PFYKSENTVT VHIRRMREKI EINSKEPEYI KVVWGLGYKI DK
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