| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2304 |
|---|
| Symbol | |
|---|
| ID | 4206199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2531101 |
|---|
| End bp | 2531943 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642566855 |
|---|
| Product | pyridoxamine kinase |
|---|
| Protein accession | YP_699579 |
|---|
| Protein GI | 110803715 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000939996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTA TGAATAAGAT TGCTGCTATT CATGATATTT CATGCTATGG GAGGGCAGCA
TTAGCAACAA TAATACCTAT ATTATCTTCA ATGGGAAATC AAGTATGTCC ACTTCCAACA
GCAGTATTGT CAACACATAC AGATGGATTT GGAAAACCAG CAATTAGAGA TTTAAGCGAT
TTTATATATG AAACCAAAGA TCATTGGAAA AGACTTAATT TAAATTTTCA ATGCATATAT
AGTGGATATT TAGCTGATCC TAATCAAGTT AAATTTGTTG AAAAATTTAT AGAAGAGTTT
AAAGAAGATG ATACTCTAGT AGTTATAGAC CCTGTTATGG CTGATAATGG TAAGCTTTAT
GATGGTATGA GTGAAAAAAT GATTGAAGAA ATGAGAACTT TAATAAAAAG TGCAGATATA
ATCACTCCAA ATATTACAGA AGCTTCTTTT CTTTTAGGAA AAGAATATAA AGAATCTTTA
AATGAAGATG AGATAAAAGA GTATTTAGTA AGTTTAGGAG ATTTAGGACC TAAAATAAGT
ATAATAACAA GTGCAACAAG TTTAAAAGGA AATGAATATA TTGATACTGT ACTATACGAT
AGAGAAGAAA AAATGTTTTA TACCTATTCT CATAAAAGAA TAAATGCTTT TTATTGTGGA
ACAGGCGATG CTTTTGCTTC ATTACTAATA GGATGGATAT TAAAAGGGGA AAGTATTGAA
AAAGCATTGG AAATGTCATG TAATTTTATT GCAGAAGCTA TAGAATATAG CGAAAAGTTT
GATTATCCTC CAAATGAAGG AATATTACTT GAAAATTTGT TATATAAATT AATAAGTAAA
TAA
|
|---|
| Protein sequence | MKPMNKIAAI HDISCYGRAA LATIIPILSS MGNQVCPLPT AVLSTHTDGF GKPAIRDLSD
FIYETKDHWK RLNLNFQCIY SGYLADPNQV KFVEKFIEEF KEDDTLVVID PVMADNGKLY
DGMSEKMIEE MRTLIKSADI ITPNITEASF LLGKEYKESL NEDEIKEYLV SLGDLGPKIS
IITSATSLKG NEYIDTVLYD REEKMFYTYS HKRINAFYCG TGDAFASLLI GWILKGESIE
KALEMSCNFI AEAIEYSEKF DYPPNEGILL ENLLYKLISK
|
|---|
| |