Gene CPR_2168 details

Gene Information

• Locus tag: CPR_2168
• Symbol: atpB
• ID: 4204100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2394081
• End bp: 2394737
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642566718
• Product: F0F1 ATP synthase subunit A
• Protein accession: YP_699468
• Protein GI: 110801683
• COG category: [C] Energy production and conversion
• COG ID: [COG0356] F0F1-type ATP synthase, subunit a
• TIGRFAM ID: [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACAG TTAAGGTTGG TAGTTTAACA ATTAGTAGTA CAATTGTTTT TCAATGGGCA 
GCAATGCTCG TTATAACAAT ATTCGCTATA TTGTCAACTA AAAATCTTAA AAATAAACCA 
GGTAAGTTAC AAGTTGTTTT AGAGTCACTT TATCAAACAG TTTATAACTT GGTAAAGAGT 
AACATGGGGG AAAGTTATAT TGGTTTTGTA CCTTATATAG GAACATTAGC AGTATTCCTA 
CTTGTATTAA ACCTTTATGG ATTAATAGGG CTTGCACCTC CTACTCAAGA TTTAAGTGTT 
GCAGTAGCAT TAACAATTAC TTCCTTTGTT GTTGTTCATG TTAACGCAAT ACGTAAATGT 
CATGTTGGAG GATATATCAA AGGATATTTT AAGCCTTATC TAGTAATGTT ACCTTTAAAC 
TTAATGGAGA GAATAATTTT CCCAGTATCT CTTGCACTAC GTTTATTTGG TAATATGTTA 
GCTGCCACTC TGTTAATAGA TTTAATGTAT TCAGGTCTAG CACATATAGG ATGGATAGCT 
CAGTTAGGTG TGCCAATAGT TGCACATGGT TTCTTCGATG TATTCGACGG AACAATACAA 
ATGATAGTAT TTACTATGTT AACAATGGTA AATATTAAAA TGACAGCAGA ACATTAG 

 

Protein sequence

MFTVKVGSLT ISSTIVFQWA AMLVITIFAI LSTKNLKNKP GKLQVVLESL YQTVYNLVKS 
NMGESYIGFV PYIGTLAVFL LVLNLYGLIG LAPPTQDLSV AVALTITSFV VVHVNAIRKC 
HVGGYIKGYF KPYLVMLPLN LMERIIFPVS LALRLFGNML AATLLIDLMY SGLAHIGWIA 
QLGVPIVAHG FFDVFDGTIQ MIVFTMLTMV NIKMTAEH