Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2157 |
Symbol | |
ID | 4205800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2384298 |
End bp | 2385068 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566707 |
Product | peptidase, putative |
Protein accession | YP_699457 |
Protein GI | 110802582 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AAGACCAATT TAAGAGATTT ATTAAAAAGG ATGGGTTTTA TGTAGTTTTA TTTGTTTGCC TATGCTTAGT AGCAACAGTT GGAGTAGTGG TAGCAAATAA AGGTGCAAAT AACACAGTAG AAGAAAATAT AGCAGAAAAC ACTATAGAAA ATACAGAGGA TAATAGAACT ACAACTGGTA ATACCTTTGA TGATGCTGAA CTTGTTGAAG GAAAAACAGA TATAGCAAAT GACTCAGAAG AGATTGCATC TAATGAAGCT AATGGTGAAG AGACAAAACC AGAAGCAAAT AATGCTGATA AGTCAGTTGC AACTTCAAGC CAAAGTCAAA GTTTTACATC ACCAATTAAG GGTGGAGTTA TAACAAGATT ATATAACTTA GAACCTAGAT TAAATGAATC AGGTCAAAGT GCATCTGTTT ATAAAGGAAT AGATATAGAG GCTGATGAAG GAACTGAAGT TTTAGCGATT GGTGATGGTA AAGTTGTAGA GGCTGGAAAA GGAAATTCAA AAGAAGGTTG CTTTGTTAAA ATAGAGCATC AAAATGGTAT TGTTGGTTTT TATGGAAACT TAGATCCAGA GATTAAAGTT AAAGAAGGGG ATAATGTTAA AAAAGGAGAT TCTATAGGTA AGATTGGAAA AACTATTCAA AATAGTCCAA GTGATAGAGT TTCTGAAAAT TATTTAATGT TCCATATGGA AAATTCTAAG GAGCCAGTAG ATCCACAAAA ATACTTAAAA GATATTCCTG TAAAAGAATA A
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Protein sequence | MNKKDQFKRF IKKDGFYVVL FVCLCLVATV GVVVANKGAN NTVEENIAEN TIENTEDNRT TTGNTFDDAE LVEGKTDIAN DSEEIASNEA NGEETKPEAN NADKSVATSS QSQSFTSPIK GGVITRLYNL EPRLNESGQS ASVYKGIDIE ADEGTEVLAI GDGKVVEAGK GNSKEGCFVK IEHQNGIVGF YGNLDPEIKV KEGDNVKKGD SIGKIGKTIQ NSPSDRVSEN YLMFHMENSK EPVDPQKYLK DIPVKE
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