| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2138 |
|---|
| Symbol | prfB |
|---|
| ID | 4204426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2368790 |
|---|
| End bp | 2369885 |
|---|
| Gene Length | 1096 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642566688 |
|---|
| Product | peptide chain release factor 2 |
|---|
| Protein accession | YP_699445 |
|---|
| Protein GI | 110802702 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATGG AACTTGAAAA TCAATTATCA AAGTTACATG AACTAAAAAA TAATTTAAAG
GAAATGGGGG CTTCACTTTG ACTTAGCATC TTTAGAGAAG AAGAGTGCAG AATTAGAGCT
TAAGATGCAA GAAGCGGGAT TTTGGGATGA TGTCCAAAAG GCCCAAGAAG TAACCCAAGA
AGCAAAAAGA GTAAAAGATA AAATTGATAA GTTTAAAAAT TTAAATGAAA GAATAGATGA
TGTAGAAGTA TTAAAAGAGC TTATGGAAGA AAATGACGAA GAAACAGCTA AAGAGATAAT
AAGCGAAGTT AAGGCTTTAA GTAAAGAGAT AGATACATTA AAAATAGAGA CAATTCTTTC
TGGGGAATAT GATAGAAATA ATGCCATATT AACACTTCAT ACAGGTGTTG GGGGAAGCGA
TGCTAATGAT TGGACAGAAA TGCTTCTTAG AATGTACACA AGATGGTGTG AAAAGAAGGG
ATATTCCTTA GAAACTATTG ATTATTTACC TGGAGATGAA GCTGGAGTTA AAAGTGTTAC
TTTAAAAGTT AAAGGTGAAT TTGCTTATGG ATATTTAAAA GCTGAAAAGG GTATTCACAG
ATTAGTTAGA ATATCACCTT TTAATGCCAA TGGTAAAAGA CAAACTTCCT TTGCTTCAGT
AGAAGTTTTA CCAGAGTTAA CATCAGATCA AGATATAGAA ATAAATCCTG TAGATTTAAG
AATAGACACT TATAGAGCAG GTGGAGCTGG TGGTCAGCAT GTAAATAAAA CTGAGTCAGC
AGTAAGAATT ACTCATATTC CAACTGGAAT AGTAGTTCAA TGCCAAAATG AGAGAAGCCA
GTTTTCTAAT AGAGATACTG CCATGGGAAT GTTAAAGTCT AAACTTATAG AACTTAAAGA
AAGAGCTCAT AAGGAAAAAA TAGAGGATTT AACAGGTGAA TTAAAAGATA TGGGATGGGG
AAGTCAGATA AGAAGTTATG TTTTCCATCC ATATTCAATG GTTAAGGATC ATAGAACTAA
TGTTGAGACA TCTAATGTTA ACGGAGTAAT GGGTGGAGAT ATAGATAATT TTATAATTGC
CTATTTAAAT TCATAA
|
|---|
| Protein sequence | MIMELENQLS KLHELKNNLK EMGASLDLAS LEKKSAELEL KMQEAGFWDD VQKAQEVTQE
AKRVKDKIDK FKNLNERIDD VEVLKELMEE NDEETAKEII SEVKALSKEI DTLKIETILS
GEYDRNNAIL TLHTGVGGSD ANDWTEMLLR MYTRWCEKKG YSLETIDYLP GDEAGVKSVT
LKVKGEFAYG YLKAEKGIHR LVRISPFNAN GKRQTSFASV EVLPELTSDQ DIEINPVDLR
IDTYRAGGAG GQHVNKTESA VRITHIPTGI VVQCQNERSQ FSNRDTAMGM LKSKLIELKE
RAHKEKIEDL TGELKDMGWG SQIRSYVFHP YSMVKDHRTN VETSNVNGVM GGDIDNFIIA
YLNS
|
|---|
| |