| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2078 |
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| Symbol | |
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| ID | 4206247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2304367 |
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| End bp | 2305743 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566628 |
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| Product | transmembrane protein Vexp3 |
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| Protein accession | YP_699387 |
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| Protein GI | 110803685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0226824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA ACGCTTTTGC ATATGTAACT AGAAAAAGTT TAAAGTCAGT AATAATATTA
TTAGTTGTTT TAGCTATGTC AGCCCTTAGT CTGATTAGTT TATCTATTAA AGATGCTACA
AATAGAGCTT CTGAGGAAAC TTTTGGTAAT ATAACAAGTA GCTTTTCTAT GGAAATAAAT
AGACAAGTAA ATCCTGGTAC ACCTAGGGGA GGAGGTAATG TAAAAGGAGA AGATATTAAA
AAAATATCTG AAAATAAAAA CATATATTCT TATGTTAAAA GGATAAATAG TGTAGCTGAT
TTAATTGATC ATGACATTGT AGAAACAAAA GAAACACTTG CAAATCAATC ACCTGAGAGA
TCAAAAAACT TTAAAAGAAC GGTTATGCTA ACGGGAGTTA ATGAATCATC AAAAGAAAAC
AAATTTGTAT CGGGAGCATA TAAATTAATT GAAGGTAAAC ATTTAGAAAA TCAGGATAAA
AATAAAGTTT TAATGCACAA AGATTTAGCA AAAAAAAATA ATCTAAAAGT TGGGGATAAA
ATAAAAATAA AATCTAATTT ATTTGATGCT GATAATGAGA AAGGTGCAAA TGAAACGGTA
GAAGTAGAAA TAAAAGGTCT ATTTGATGGA CATAATAATG GTGTTGTAAG TGTGCCACAA
GAACTTTATG AAAATACTCT AATAACTGAT ATTAATACAG CTGCTAAAGT TTACGGAAAC
ACAGAAGATA CAGCAGCATA TCAAGATGCG ACTTTTTTTG TAAAAGGTGA TAAGAATTTA
GAACATGTAA TAAAAGATAT AGGAAAACTT GATATAAATT GGAGAGAATA TAATTTGATT
AAAAGTTCAT CAAATTACCC TGCATTGCAA CAGTCTATAT CAGGTATATA TTCAATAGCT
AATAAGTTAT TTGCTGGATC TTTGATATTT GCAGGTGTTG TAGTTTCATT ATTGTTATTT
TTATGGATAA ATGCTAGAAA AAAAGAGATA GCAGTTTTAT TATCTTTAGG AATTTCAAAA
TTAACAATTT TTGGACAATT CTTAATAGAG CTGATTTTTA TATCAATACC AGCATTTATA
GGCTCTTATT TCTTAGCAAG TTATACAGGT GATAAACTTG GGAATAATAT ATTAAATAGA
GTAACTGGTG ATATAGCTAA AAAAATAGCA AAACAATCAT TATCGAGCCA GCTTGGTGGA
GGGGCTGAAG TTGATGGATT TAATAAAACT TTAACAAGTT TAGATATTAA TATATTACCA
AAGTCTATGG TGTATGTAAT TCTATTCATG AGTTTAGTGC TTATTATATC TTTGATTATT
TCATCATATA GTATTTTAAA GAAAAATCCA AAAGAACTAT TAATTGATAA TGATTAA
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| Protein sequence | MIKNAFAYVT RKSLKSVIIL LVVLAMSALS LISLSIKDAT NRASEETFGN ITSSFSMEIN
RQVNPGTPRG GGNVKGEDIK KISENKNIYS YVKRINSVAD LIDHDIVETK ETLANQSPER
SKNFKRTVML TGVNESSKEN KFVSGAYKLI EGKHLENQDK NKVLMHKDLA KKNNLKVGDK
IKIKSNLFDA DNEKGANETV EVEIKGLFDG HNNGVVSVPQ ELYENTLITD INTAAKVYGN
TEDTAAYQDA TFFVKGDKNL EHVIKDIGKL DINWREYNLI KSSSNYPALQ QSISGIYSIA
NKLFAGSLIF AGVVVSLLLF LWINARKKEI AVLLSLGISK LTIFGQFLIE LIFISIPAFI
GSYFLASYTG DKLGNNILNR VTGDIAKKIA KQSLSSQLGG GAEVDGFNKT LTSLDINILP
KSMVYVILFM SLVLIISLII SSYSILKKNP KELLIDND
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