| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1939 |
|---|
| Symbol | |
|---|
| ID | 4206368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2144221 |
|---|
| End bp | 2144652 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642566489 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_699249 |
|---|
| Protein GI | 110803497 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAG AAAAAAGTCT TGTTTTAATA AAACCTGATG CCGTTGAAAG AAATTTAATA
GGTAAGATAT TAGAGGTTTA TGAGGGAGCA GGATTAAAGA TAAAGGCTAT GGAAATGAAG
CAAATAAATA AGGATTTTGC TGAAAAACAT TATGAAGAAC ATAGAGATAA GCAATTTTTT
AATTCTCTAA TAAAATATAT AACAAGAAGT CCTCTTGTAG CTTTAATTCT TGAAGGAGAA
GATGCTATAG ATAAAATAAG ATCTCTAAAT GGGGCAACAA ATCCAGAAAA GGCTGAGTTT
GGAACAATAA GAAGAAGATT TGCCTTAAGT GGAACAGAAA ATTCAGTTCA TGCATCAGAT
TCAATAGAAA GTGCTGAGAA AGAAATTAAG CTATGGTTCC CAAAAGTATT TTATGAAGAA
ATTTGTGGAT AA
|
|---|
| Protein sequence | MRLEKSLVLI KPDAVERNLI GKILEVYEGA GLKIKAMEMK QINKDFAEKH YEEHRDKQFF
NSLIKYITRS PLVALILEGE DAIDKIRSLN GATNPEKAEF GTIRRRFALS GTENSVHASD
SIESAEKEIK LWFPKVFYEE ICG
|
|---|
| |