| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1901 |
|---|
| Symbol | |
|---|
| ID | 4204740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2099452 |
|---|
| End bp | 2100894 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642566451 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_699211 |
|---|
| Protein GI | 110802256 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATATTA AAATATATCT TAATGACTTA AAGTATAGAT ATGACGTTTA TCAAATGTTT
AATATATTCT ATACTTTTAA GGAATTAAAG TTTGTAAATG AAGATGAAGA GAGAGACTAC
GATGTCTTTA TATCTGAAAA TATGGTTAAA ATTTCAGAGG GAGACAATAG TTTTTCTTAT
GAATTCAAAG AAGGATACGG ATTTAAAACT GAACTTAAAA AGGGAATATT CAAATTTTTA
TCTGAAACTC TTAAGGATGA ATATCCTTGG GGAACATTAG TTGGAATAAG ACCAAGTAAA
ATAGCATTAT CTCTAATAAG AGAAGGAAAA TCTGAGGAAG AGATAATAAA ATATTTTGAA
GATAATTATA TGGCTAGGGA AGAAAAAGCT AAGCTTTGCA TAGAAGTTGC AGAAAGAGAA
GAAAGTTTTG TAAACAAAGA GGAAAAAAAC ATAAGTATAT ATGTTGGTAT GCCTTTTTGT
CCTACAAGAT GCCTTTATTG TTCCTTTGCA GCAAATCCTA TAGCTGGATG CAAGAAAGAT
GTTGAGCCTT ATTTAGAAGC TTTAAGCAAA GAAATTTCAG CTATAAGTGA TTATGTATCA
AAGAAAGGCT TAAAGATAGA AACTGTTTAT TTTGGTGGAG GCACTCCAAC CTCAGTAAAT
AATGAACAGT TTGAAGTATT AATGAAACAT ATATATGATA GTTTCGTTAA TAATAAAGGA
ATAAAGGAGT TCACTGTTGA ATGTGGAAGA CCTGATTCTA TAACTGAAGA AAAATTAAAA
ACTATGAAGA GATATGAAGT ATCTAGAATA TCTATAAATC CTCAAAGTAT GAACGATAAA
ACCTTGAAAT CAATAGGTAG AGGGCATTTA ACAGAGGATG TAGTGGATAA ATTCAATTTG
GCAAGAAGCT TAGACTTTGA TAACATAAAT ATGGATATTA TAATAGGTCT TCCAAATGAA
GATATTTCAG AGGTTTCTAA AACATGCTCT ATGATAAAGG AGCTTAATCC AGATAGTTTA
ACTATTCATG GTATGTCTAT TAAAAGGGCA TCAAGACTTC ATGAAAATTT AGTTTTACAT
AATACTATAA CTATTGCAGA GCAAAAAAAT CTTAATAAGA TGTATGAGAT GAGTAAAGTT
TTAGGTAGAG AACTAAATAT GCATCCATAT TATATGTATA GACAAAAAAA TATGGTTGGT
AATATGGAGA ATGTAGGATA TTCAAAAGAT AACAAGGAAT GTATCTACAA TATTCAAATG
ATTGAAGATA AGCAAACTAT AATTGCACTA GGAGCAGATG CCGTTTCTAA GGTAGTGTTT
TTAGAAGAAG ATAAAAATCG TATAGAAAGA TTTGCAAATG TTAAAGATGT AAAGGAATAT
GTAAAAAGAA TAGAGGAAAT GGTTGAAGGT AAGATAGAAT TACTTGATAC TTTATATAAA
TAA
|
|---|
| Protein sequence | MYIKIYLNDL KYRYDVYQMF NIFYTFKELK FVNEDEERDY DVFISENMVK ISEGDNSFSY
EFKEGYGFKT ELKKGIFKFL SETLKDEYPW GTLVGIRPSK IALSLIREGK SEEEIIKYFE
DNYMAREEKA KLCIEVAERE ESFVNKEEKN ISIYVGMPFC PTRCLYCSFA ANPIAGCKKD
VEPYLEALSK EISAISDYVS KKGLKIETVY FGGGTPTSVN NEQFEVLMKH IYDSFVNNKG
IKEFTVECGR PDSITEEKLK TMKRYEVSRI SINPQSMNDK TLKSIGRGHL TEDVVDKFNL
ARSLDFDNIN MDIIIGLPNE DISEVSKTCS MIKELNPDSL TIHGMSIKRA SRLHENLVLH
NTITIAEQKN LNKMYEMSKV LGRELNMHPY YMYRQKNMVG NMENVGYSKD NKECIYNIQM
IEDKQTIIAL GADAVSKVVF LEEDKNRIER FANVKDVKEY VKRIEEMVEG KIELLDTLYK
|
|---|
| |