| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1869 |
|---|
| Symbol | |
|---|
| ID | 4206397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2064869 |
|---|
| End bp | 2065606 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642566419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_699179 |
|---|
| Protein GI | 110803562 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTT ATAAGATGAT GGCAAAAGTA TATGATGAAC TTATATATGA AGATGTAAAC
TATGAGAACA TAGCAGAATA TGCCTTATCA AAATGTGATA AGTATAATAT TAATAAGGAA
ATGTATTTAG ATTTAGCCTG TGGAACAGGA AATGTTGGTG TTCATGTAGG AAAATCCTTC
AAAGAAAATT ATTTTGTTGA TCTTTCACAA GATATGCTTA TAGAAGCCGA TAAAAAGCTT
AGAGAACATA GAGTTAGAGG TAAGATAGTT TGCCAAGACA TGTGTGACTT AGGGTTAAAT
AGAAAGTTTG ATTTAATAAC ATGTGTTTTA GATTCAACAA ATTATATTTT AGATGATGAA
AGTGTAGAAA ATTATTTAAG AGGGGTATAT AATCATTTAA AAGAGGATGG TTTATTTGTA
TTTGATATAA ATTCATACTA TAAAATATCA GAAGTATTAG GCAACAATGT CTACACATAT
GATAGTGAAG AATTATTTTA TGCTTGGGAA AATATTTTTG AGGATGAAAT AGTGGAGATG
AATTTAAATT TCTTTGTGAA AGATGGAGAA AAGTATGAAA GATTCACAGA GATTCATGAA
GAAAGAGCTT ATAAGGAAAG TGAAATAGAA CATATTCTCG ATGTAATAGG TTTTAAAATA
CTAGAAAAGC ATAATGGTTA TACAGAAGAT GAAGTAACAC CAGATACTGA AAGAATAGTT
TATATAGTAA AAAAATAA
|
|---|
| Protein sequence | MKSYKMMAKV YDELIYEDVN YENIAEYALS KCDKYNINKE MYLDLACGTG NVGVHVGKSF
KENYFVDLSQ DMLIEADKKL REHRVRGKIV CQDMCDLGLN RKFDLITCVL DSTNYILDDE
SVENYLRGVY NHLKEDGLFV FDINSYYKIS EVLGNNVYTY DSEELFYAWE NIFEDEIVEM
NLNFFVKDGE KYERFTEIHE ERAYKESEIE HILDVIGFKI LEKHNGYTED EVTPDTERIV
YIVKK
|
|---|
| |