| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1862 |
|---|
| Symbol | |
|---|
| ID | 4206293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2062030 |
|---|
| End bp | 2062584 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642566412 |
|---|
| Product | MutT/NUDIX family hydrolase |
|---|
| Protein accession | YP_699176 |
|---|
| Protein GI | 110803614 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.168292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAA AGGATATAAA AAAATTAACT GATTGCAAGT TTTTAAACTT ATATAAATTA
GATATTGAGA ATAAGGTTGG AAATTCTAAA GAATATTTTA TAGCAAGTAG AAGAACAGAA
AAAGATTTAA GCTGCGTTGT TAATAAACAT CATAAGGCAG ATGGTGTTAT GATAATTCCA
ATAACAGAAA ATGATGAGTT TGTTTTGTTA AAGCAATTTA GACCTGCTAT AAATGATTAT
ATATATGAAT TCCCAGCTGG ACTTATAGAC AATGGAGAAG ATGTAATAAA AGCTGCTACA
AGAGAGCTTT TTGAAGAAAC TGGACTTTTA GCTAGTGAAA GTGAATATTT AATCAAGCCT
AGCTATACTT CAGTAGGTAT GTCTGATGAA TCTGTAGCTG TGGTTAAAAT GAAGGTTTAT
GGAAATATTT CAACAGAAAA TTTAGAAGAA AATGAAGAAA TAGAAGTTAT TAAAGTGCCT
AGAAAAGAGG CTAAAAACTT TGTTAAAGAA AATAATGTAT CAATAAAAAC TGCATTGGTT
TTAAGCTTTA TGTAG
|
|---|
| Protein sequence | MKIKDIKKLT DCKFLNLYKL DIENKVGNSK EYFIASRRTE KDLSCVVNKH HKADGVMIIP
ITENDEFVLL KQFRPAINDY IYEFPAGLID NGEDVIKAAT RELFEETGLL ASESEYLIKP
SYTSVGMSDE SVAVVKMKVY GNISTENLEE NEEIEVIKVP RKEAKNFVKE NNVSIKTALV
LSFM
|
|---|
| |