Gene CPR_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1854 
Symbol 
ID4205647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp2055302 
End bp2055967 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content30% 
IMG OID642566404 
Productpotassium uptake protein 
Protein accessionYP_699168 
Protein GI110802535 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0461191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTA AACAATTCGT TATTATAGGA TTAGGAAGAT TTGGATCATC AGTAGCTAAA 
ACTTTATATG CTTTAGGTCA TGATGTTTTA GCAATTGATT ATAATGAGGA TTTAGTTCAA 
GAAATATCAG ATAGTGTAAC TCATGCAGTT CAAATGGATG CCACAGATGA AAATGCTTTA 
AGAACTTTAG GATTAAGAAA TTTTGATGTG GCTGTAGTTA CAATAGGAGC TAACATACAA 
GCAAGTGTTA TGGCAACATT ACTTGTAAAA GATATGGGAA TAAAATATAT AATAGCTAAG 
GGAAATAGTG ATTTACATGC TAAAGTTTTA TATAAAATAG GAGCAGACAG AGTAATCTTA 
CCTGAGAAGG ATATGGGAGT TAGAGTAGCT CATAACTTAG TTTCTTCAAG CATCTTAGAT 
TATATAGAAT TATCACCAGA TTATTCTATA ATTGAGATAG AAAGTCCAAA AGAATGGTAT 
GGAAAGTCTA TGAAAGAATT AAGTTTAAGA AGTAAATACG GAATAAACGT AATGGCTATT 
AAGAGAAACA ATGAAGTTAA TATATCTCCA GATGCAGATG ATGTTATTAA TAAAGATGAC 
ATAGTAGTTG CTATAGGTTC TGCAGAGGAT TTAACAAAAT TAGAAGGAAA GATATTTAGA 
CATTAA
 
Protein sequence
MSSKQFVIIG LGRFGSSVAK TLYALGHDVL AIDYNEDLVQ EISDSVTHAV QMDATDENAL 
RTLGLRNFDV AVVTIGANIQ ASVMATLLVK DMGIKYIIAK GNSDLHAKVL YKIGADRVIL 
PEKDMGVRVA HNLVSSSILD YIELSPDYSI IEIESPKEWY GKSMKELSLR SKYGINVMAI 
KRNNEVNISP DADDVINKDD IVVAIGSAED LTKLEGKIFR H